Information for 4-CTSGGKSYTTTCRGCC (Motif 8)

G T A C A C G T A T G C A C T G A C T G C A T G A T C G A G C T A C G T A C G T A C G T A G T C T C G A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A G C T A C T G C G T A C G T A C G T A C T G A A T G C G T A C A G T C A G T C A T C G G T C A A C T G
p-value:1e-10
log p-value:-2.434e+01
Information Content per bp:1.864
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.7 +/- 28.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTSGGKSYTTTCRGCC
---GGGGATTTCC---
 G T A C A C G T A T G C A C T G A C T G C A T G A T C G A G C T A C G T A C G T A C G T A G T C T C G A A C T G A G T C A G T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTSGGKSYTTTCRGCC
--GGGGATTTCC----
 G T A C A C G T A T G C A C T G A C T G C A T G A T C G A G C T A C G T A C G T A C G T A G T C T C G A A C T G A G T C A G T C
A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTSGGKSYTTTCRGCC
---GGGAATTTCC---
 G T A C A C G T A T G C A C T G A C T G C A T G A T C G A G C T A C G T A C G T A C G T A G T C T C G A A C T G A G T C A G T C
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:CTSGGKSYTTTCRGCC--
--------TTCCCGCCWG
 G T A C A C G T A T G C A C T G A C T G C A T G A T C G A G C T A C G T A C G T A C G T A G T C T C G A A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTSGGKSYTTTCRGCC
-NGGGGATTTCCC---
 G T A C A C G T A T G C A C T G A C T G C A T G A T C G A G C T A C G T A C G T A C G T A G T C T C G A A C T G A G T C A G T C
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CTSGGKSYTTTCRGCC
GYCTGGYYTNTGTCA---
 A C G T A C G T G T A C A C G T A T G C A C T G A C T G C A T G A T C G A G C T A C G T A C G T A C G T A G T C T C G A A C T G A G T C A G T C
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CTSGGKSYTTTCRGCC
------DTTTCCCGCC
 G T A C A C G T A T G C A C T G A C T G C A T G A T C G A G C T A C G T A C G T A C G T A G T C T C G A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTSGGKSYTTTCRGCC
-NNGCACCTTTCTCC-
 G T A C A C G T A T G C A C T G A C T G C A T G A T C G A G C T A C G T A C G T A C G T A G T C T C G A A C T G A G T C A G T C
A C G T A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CTSGGKSYTTTCRGCC
-----TGGTTTCAGT-
 G T A C A C G T A T G C A C T G A C T G C A T G A T C G A G C T A C G T A C G T A C G T A G T C T C G A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CTSGGKSYTTTCRGCC
---GGGAATTTCC---
 G T A C A C G T A T G C A C T G A C T G C A T G A T C G A G C T A C G T A C G T A C G T A G T C T C G A A C T G A G T C A G T C
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T