Information for 11-GGGACAATCG (Motif 19)

A C T G A C T G A C T G C G T A G T A C C T G A C G T A A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C G T A G C T C A T G A C G T A G T C A G T C A G T C
p-value:1e-7
log p-value:-1.789e+01
Information Content per bp:1.924
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif21.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets40.1 +/- 21.0bp
Average Position of motif in Background45.7 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0173.1_Sox21_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGGACAATCG---
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A G T A C C T G A C G T A A C G T A G T C A C T G A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGGACAATCG-
-RAACAATGGN
 A C T G A C T G A C T G C G T A G T A C C T G A C G T A A C G T A G T C A C T G A C G T
A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGGACAATCG-
-GAACAATGGN
 A C T G A C T G A C T G C G T A G T A C C T G A C G T A A C G T A G T C A C T G A C G T
A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

PB0070.1_Sox30_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGGACAATCG----
AATGAACAATGGAATT
 A C G T A C G T A C T G A C T G A C T G C G T A G T A C C T G A C G T A A C G T A G T C A C T G A C G T A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

Sox17/MA0078.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGGACAATCG-
--GACAATGNN
 A C T G A C T G A C T G C G T A G T A C C T G A C G T A A C G T A G T C A C T G A C G T
A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGGACAATCG
RNAACAATGG
 A C T G A C T G A C T G C G T A G T A C C T G A C G T A A C G T A G T C A C T G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

SOX9/MA0077.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGGACAATCG
-GAACAATGG
 A C T G A C T G A C T G C G T A G T A C C T G A C G T A A C G T A G T C A C T G
A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGGACAATCG
VRAACAATGG
 A C T G A C T G A C T G C G T A G T A C C T G A C G T A A C G T A G T C A C T G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGGACAATCG---
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A G T A C C T G A C G T A A C G T A G T C A C T G A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGGACAATCG
AAAACAATGG
 A C T G A C T G A C T G C G T A G T A C C T G A C G T A A C G T A G T C A C T G
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G