Information for 9-GTCCCGGTGA (Motif 14)

A T C G A G C T A G T C T G A C T A G C A T C G A C T G A C G T A T C G C G T A
Reverse Opposite:
C G A T A T G C G T C A A G T C A T G C A T C G A C T G A C T G C T G A T A G C
p-value:1e-8
log p-value:-1.958e+01
Information Content per bp:1.758
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif2.80%
Number of Background Sequences with motif337.1
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets46.5 +/- 25.2bp
Average Position of motif in Background50.6 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GTCCCGGTGA-
ACCACTCTCGGTCAC
 A C G T A C G T A C G T A C G T A T C G A G C T A G T C T G A C T A G C A T C G A C T G A C G T A T C G C G T A A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

ESR1/MA0112.3/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTCCCGGTGA----
AAGGTCACGGTGACCTG
 A C G T A C G T A C G T A T C G A G C T A G T C T G A C T A G C A T C G A C T G A C G T A T C G C G T A A C G T A C G T A C G T A C G T
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GTCCCGGTGA
----TGGGGA
 A T C G A G C T A G T C T G A C T A G C A T C G A C T G A C G T A T C G C G T A
A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTCCCGGTGA-
AGTATTCTCGGTTGC
 A C G T A C G T A C G T A C G T A T C G A G C T A G T C T G A C T A G C A T C G A C T G A C G T A T C G C G T A A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTCCCGGTGA
AGTCACGC---
 A C G T A T C G A G C T A G T C T G A C T A G C A T C G A C T G A C G T A T C G C G T A
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTCCCGGTGA--
TCCCCTGGGGAC
 A T C G A G C T A G T C T G A C T A G C A T C G A C T G A C G T A T C G C G T A A C G T A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

PB0103.1_Zic3_1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTCCCGGTGA--
NCCCCCCCGGGGGGN
 A C G T A C G T A C G T A T C G A G C T A G T C T G A C T A G C A T C G A C T G A C G T A T C G C G T A A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTCCCGGTGA----
GGTCANNGTGACCTN
 A C G T A T C G A G C T A G T C T G A C T A G C A T C G A C T G A C G T A T C G C G T A A C G T A C G T A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTCCCGGTGA--
ACCCCCCCGGGGGGN
 A C G T A C G T A C G T A T C G A G C T A G T C T G A C T A G C A T C G A C T G A C G T A T C G C G T A A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GTCCCGGTGA-
NNAATTCTCGNTNAN
 A C G T A C G T A C G T A C G T A T C G A G C T A G T C T G A C T A G C A T C G A C T G A C G T A T C G C G T A A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A