Information for 6-GTCCCAGGCC (Motif 12)

C A T G A C G T A T G C T G A C G T A C T C G A T A C G C T A G A T G C T A G C
Reverse Opposite:
A T C G T A C G G A T C A T G C A G C T C A T G A C T G A T C G T G C A G T A C
p-value:1e-9
log p-value:-2.129e+01
Information Content per bp:1.652
Number of Target Sequences with motif95.0
Percentage of Target Sequences with motif9.83%
Number of Background Sequences with motif2399.3
Percentage of Background Sequences with motif5.00%
Average Position of motif in Targets49.1 +/- 25.6bp
Average Position of motif in Background49.3 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GTCCCAGGCC-
---CTAGGCCT
 C A T G A C G T A T G C T G A C G T A C T C G A T A C G C T A G A T G C T A G C A C G T
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GTCCCAGGCC
HTTTCCCASG--
 A C G T A C G T C A T G A C G T A T G C T G A C G T A C T C G A T A C G C T A G A T G C T A G C
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GTCCCAGGCC-
---CNAGGCCT
 C A T G A C G T A T G C T G A C G T A C T C G A T A C G C T A G A T G C T A G C A C G T
A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTCCCAGGCC------
-TCCCAGMCRAGCCCC
 C A T G A C G T A T G C T G A C G T A C T C G A T A C G C T A G A T G C T A G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTCCCAGGCC--
GGGGCCGAGGCCTG
 A C G T A C G T C A T G A C G T A T G C T G A C G T A C T C G A T A C G C T A G A T G C T A G C A C G T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTCCCAGGCC
TGCCCAGNHW
 C A T G A C G T A T G C T G A C G T A C T C G A T A C G C T A G A T G C T A G C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

TFAP2A/MA0003.3/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTCCCAGGCC
CGCCTCAGGCA
 A C G T C A T G A C G T A T G C T G A C G T A C T C G A T A C G C T A G A T G C T A G C
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GTCCCAGGCC---
NNAGTCCCACTCNNNN
 A C G T A C G T A C G T C A T G A C G T A T G C T G A C G T A C T C G A T A C G C T A G A T G C T A G C A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTCCCAGGCC-
-NTCAAGGTCA
 C A T G A C G T A T G C T G A C G T A C T C G A T A C G C T A G A T G C T A G C A C G T
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTCCCAGGCC
AGCCTCAGGCA
 A C G T C A T G A C G T A T G C T G A C G T A C T C G A T A C G C T A G A T G C T A G C
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A