Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-180 | -4.147e+02 | 0.0000 | 163.0 | 18.65% | 300.0 | 0.62% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-133 | -3.064e+02 | 0.0000 | 172.0 | 19.68% | 705.8 | 1.47% | motif file (matrix) |
svg |
3 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-26 | -6.121e+01 | 0.0000 | 34.0 | 3.89% | 134.0 | 0.28% | motif file (matrix) |
svg |
4 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-11 | -2.621e+01 | 0.0000 | 106.0 | 12.13% | 2843.1 | 5.92% | motif file (matrix) |
svg |
5 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-10 | -2.400e+01 | 0.0000 | 102.0 | 11.67% | 2797.0 | 5.82% | motif file (matrix) |
svg |
6 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-9 | -2.140e+01 | 0.0000 | 32.0 | 3.66% | 471.9 | 0.98% | motif file (matrix) |
svg |
7 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-9 | -2.137e+01 | 0.0000 | 89.0 | 10.18% | 2422.6 | 5.04% | motif file (matrix) |
svg |
8 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-9 | -2.119e+01 | 0.0000 | 51.0 | 5.84% | 1052.0 | 2.19% | motif file (matrix) |
svg |
9 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-8 | -1.957e+01 | 0.0000 | 87.0 | 9.95% | 2437.3 | 5.07% | motif file (matrix) |
svg |
10 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-8 | -1.850e+01 | 0.0000 | 46.0 | 5.26% | 972.8 | 2.02% | motif file (matrix) |
svg |
11 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-7 | -1.811e+01 | 0.0000 | 49.0 | 5.61% | 1087.3 | 2.26% | motif file (matrix) |
svg |
12 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-7 | -1.751e+01 | 0.0000 | 119.0 | 13.62% | 3892.2 | 8.10% | motif file (matrix) |
svg |
13 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-7 | -1.717e+01 | 0.0000 | 56.0 | 6.41% | 1371.1 | 2.85% | motif file (matrix) |
svg |
14 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-7 | -1.661e+01 | 0.0000 | 66.0 | 7.55% | 1771.9 | 3.69% | motif file (matrix) |
svg |
15 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-6 | -1.518e+01 | 0.0000 | 36.0 | 4.12% | 748.8 | 1.56% | motif file (matrix) |
svg |
16 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-6 | -1.480e+01 | 0.0000 | 32.0 | 3.66% | 630.1 | 1.31% | motif file (matrix) |
svg |
17 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-6 | -1.468e+01 | 0.0000 | 25.0 | 2.86% | 420.0 | 0.87% | motif file (matrix) |
svg |
18 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-6 | -1.440e+01 | 0.0000 | 20.0 | 2.29% | 286.1 | 0.60% | motif file (matrix) |
svg |
19 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-6 | -1.439e+01 | 0.0000 | 8.0 | 0.92% | 37.1 | 0.08% | motif file (matrix) |
svg |
20 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-6 | -1.415e+01 | 0.0000 | 104.0 | 11.90% | 3493.1 | 7.27% | motif file (matrix) |
svg |
21 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.413e+01 | 0.0000 | 20.0 | 2.29% | 291.9 | 0.61% | motif file (matrix) |
svg |
22 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-6 | -1.404e+01 | 0.0000 | 32.0 | 3.66% | 653.6 | 1.36% | motif file (matrix) |
svg |
23 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-6 | -1.403e+01 | 0.0000 | 20.0 | 2.29% | 293.3 | 0.61% | motif file (matrix) |
svg |
24 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-5 | -1.368e+01 | 0.0000 | 64.0 | 7.32% | 1847.1 | 3.84% | motif file (matrix) |
svg |
25 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-5 | -1.321e+01 | 0.0000 | 24.0 | 2.75% | 425.2 | 0.88% | motif file (matrix) |
svg |
26 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-5 | -1.316e+01 | 0.0000 | 31.0 | 3.55% | 648.0 | 1.35% | motif file (matrix) |
svg |
27 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-5 | -1.304e+01 | 0.0000 | 56.0 | 6.41% | 1566.9 | 3.26% | motif file (matrix) |
svg |
28 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-5 | -1.274e+01 | 0.0000 | 119.0 | 13.62% | 4279.5 | 8.91% | motif file (matrix) |
svg |
29 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-5 | -1.174e+01 | 0.0001 | 28.0 | 3.20% | 595.2 | 1.24% | motif file (matrix) |
svg |
30 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-5 | -1.165e+01 | 0.0001 | 85.0 | 9.73% | 2861.1 | 5.95% | motif file (matrix) |
svg |
31 |
| PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer | 1e-5 | -1.162e+01 | 0.0001 | 14.0 | 1.60% | 182.0 | 0.38% | motif file (matrix) |
svg |
32 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.151e+01 | 0.0001 | 67.0 | 7.67% | 2104.6 | 4.38% | motif file (matrix) |
svg |
33 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.074e+01 | 0.0002 | 66.0 | 7.55% | 2115.6 | 4.40% | motif file (matrix) |
svg |
34 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-4 | -1.046e+01 | 0.0003 | 48.0 | 5.49% | 1393.5 | 2.90% | motif file (matrix) |
svg |
35 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-4 | -1.024e+01 | 0.0004 | 115.0 | 13.16% | 4340.5 | 9.03% | motif file (matrix) |
svg |
36 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-4 | -1.019e+01 | 0.0004 | 35.0 | 4.00% | 904.7 | 1.88% | motif file (matrix) |
svg |
37 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-4 | -1.005e+01 | 0.0004 | 77.0 | 8.81% | 2641.3 | 5.50% | motif file (matrix) |
svg |
38 |
| Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer | 1e-4 | -9.786e+00 | 0.0005 | 59.0 | 6.75% | 1887.1 | 3.93% | motif file (matrix) |
svg |
39 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-4 | -9.694e+00 | 0.0006 | 31.0 | 3.55% | 778.0 | 1.62% | motif file (matrix) |
svg |
40 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-4 | -9.484e+00 | 0.0007 | 161.0 | 18.42% | 6618.7 | 13.78% | motif file (matrix) |
svg |
41 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-4 | -9.337e+00 | 0.0008 | 92.0 | 10.53% | 3375.7 | 7.03% | motif file (matrix) |
svg |
42 |
| NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer | 1e-3 | -8.904e+00 | 0.0012 | 10.0 | 1.14% | 126.9 | 0.26% | motif file (matrix) |
svg |
43 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-3 | -8.838e+00 | 0.0012 | 71.0 | 8.12% | 2479.0 | 5.16% | motif file (matrix) |
svg |
44 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-3 | -8.723e+00 | 0.0013 | 48.0 | 5.49% | 1500.9 | 3.12% | motif file (matrix) |
svg |
45 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-3 | -8.248e+00 | 0.0021 | 40.0 | 4.58% | 1202.8 | 2.50% | motif file (matrix) |
svg |
46 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-3 | -8.078e+00 | 0.0025 | 117.0 | 13.39% | 4681.0 | 9.74% | motif file (matrix) |
svg |
47 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-3 | -8.016e+00 | 0.0026 | 18.0 | 2.06% | 384.8 | 0.80% | motif file (matrix) |
svg |
48 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-3 | -8.009e+00 | 0.0026 | 32.0 | 3.66% | 897.1 | 1.87% | motif file (matrix) |
svg |
49 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-3 | -7.808e+00 | 0.0030 | 184.0 | 21.05% | 8001.4 | 16.65% | motif file (matrix) |
svg |
50 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-3 | -7.330e+00 | 0.0048 | 60.0 | 6.86% | 2124.1 | 4.42% | motif file (matrix) |
svg |
51 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-3 | -7.317e+00 | 0.0048 | 15.0 | 1.72% | 307.8 | 0.64% | motif file (matrix) |
svg |
52 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-3 | -7.287e+00 | 0.0048 | 70.0 | 8.01% | 2577.4 | 5.36% | motif file (matrix) |
svg |
53 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-3 | -7.271e+00 | 0.0048 | 311.0 | 35.58% | 14647.4 | 30.49% | motif file (matrix) |
svg |
54 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-3 | -7.269e+00 | 0.0048 | 131.0 | 14.99% | 5463.2 | 11.37% | motif file (matrix) |
svg |
55 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.206e+00 | 0.0049 | 54.0 | 6.18% | 1870.6 | 3.89% | motif file (matrix) |
svg |
56 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-3 | -7.169e+00 | 0.0050 | 14.0 | 1.60% | 279.6 | 0.58% | motif file (matrix) |
svg |
57 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.148e+00 | 0.0050 | 45.0 | 5.15% | 1485.9 | 3.09% | motif file (matrix) |
svg |
58 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-3 | -7.141e+00 | 0.0050 | 41.0 | 4.69% | 1316.2 | 2.74% | motif file (matrix) |
svg |
59 |
| Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer | 1e-3 | -7.077e+00 | 0.0052 | 6.0 | 0.69% | 59.7 | 0.12% | motif file (matrix) |
svg |
60 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-2 | -6.800e+00 | 0.0068 | 64.0 | 7.32% | 2353.6 | 4.90% | motif file (matrix) |
svg |
61 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.702e+00 | 0.0073 | 33.0 | 3.78% | 1013.6 | 2.11% | motif file (matrix) |
svg |
62 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-2 | -6.630e+00 | 0.0078 | 7.0 | 0.80% | 88.9 | 0.19% | motif file (matrix) |
svg |
63 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.624e+00 | 0.0078 | 169.0 | 19.34% | 7447.9 | 15.50% | motif file (matrix) |
svg |
64 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-2 | -6.562e+00 | 0.0080 | 28.0 | 3.20% | 819.2 | 1.71% | motif file (matrix) |
svg |
65 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.304e+00 | 0.0102 | 142.0 | 16.25% | 6152.1 | 12.80% | motif file (matrix) |
svg |
66 |
| LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.148e+00 | 0.0118 | 6.0 | 0.69% | 71.1 | 0.15% | motif file (matrix) |
svg |
67 |
| Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer | 1e-2 | -6.040e+00 | 0.0129 | 12.0 | 1.37% | 248.0 | 0.52% | motif file (matrix) |
svg |
68 |
| X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -6.024e+00 | 0.0130 | 11.0 | 1.26% | 216.4 | 0.45% | motif file (matrix) |
svg |
69 |
| ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.679e+00 | 0.0180 | 124.0 | 14.19% | 5362.5 | 11.16% | motif file (matrix) |
svg |
70 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.629e+00 | 0.0187 | 19.0 | 2.17% | 516.3 | 1.07% | motif file (matrix) |
svg |
71 |
| RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-2 | -5.557e+00 | 0.0198 | 11.0 | 1.26% | 230.7 | 0.48% | motif file (matrix) |
svg |
72 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-2 | -5.500e+00 | 0.0207 | 35.0 | 4.00% | 1182.0 | 2.46% | motif file (matrix) |
svg |
73 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.455e+00 | 0.0213 | 53.0 | 6.06% | 1988.4 | 4.14% | motif file (matrix) |
svg |
74 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.422e+00 | 0.0217 | 190.0 | 21.74% | 8743.2 | 18.20% | motif file (matrix) |
svg |
75 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.183e+00 | 0.0272 | 24.0 | 2.75% | 740.3 | 1.54% | motif file (matrix) |
svg |
76 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.103e+00 | 0.0291 | 75.0 | 8.58% | 3060.0 | 6.37% | motif file (matrix) |
svg |
77 |
| Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer | 1e-2 | -5.039e+00 | 0.0306 | 15.0 | 1.72% | 392.1 | 0.82% | motif file (matrix) |
svg |
78 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-2 | -4.988e+00 | 0.0318 | 45.0 | 5.15% | 1671.3 | 3.48% | motif file (matrix) |
svg |
79 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-2 | -4.873e+00 | 0.0352 | 18.0 | 2.06% | 516.7 | 1.08% | motif file (matrix) |
svg |
80 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-2 | -4.786e+00 | 0.0380 | 25.0 | 2.86% | 808.8 | 1.68% | motif file (matrix) |
svg |
81 |
| GFY(?)/Promoter/Homer | 1e-2 | -4.768e+00 | 0.0382 | 10.0 | 1.14% | 222.6 | 0.46% | motif file (matrix) |
svg |
82 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-2 | -4.739e+00 | 0.0388 | 10.0 | 1.14% | 223.6 | 0.47% | motif file (matrix) |
svg |
83 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-2 | -4.721e+00 | 0.0391 | 41.0 | 4.69% | 1516.2 | 3.16% | motif file (matrix) |
svg |
84 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-2 | -4.607e+00 | 0.0433 | 57.0 | 6.52% | 2269.9 | 4.72% | motif file (matrix) |
svg |