Information for 6-GGAAWTTCCC (Motif 8)

C T A G A T C G T C G A G C T A C G A T A C G T G A C T T G A C A G T C G A T C
Reverse Opposite:
C T A G A C T G A C T G C T G A G T C A C G T A C G A T A G C T A T G C A G T C
p-value:1e-13
log p-value:-2.996e+01
Information Content per bp:1.688
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.23%
Number of Background Sequences with motif450.3
Percentage of Background Sequences with motif0.94%
Average Position of motif in Targets56.4 +/- 26.2bp
Average Position of motif in Background51.3 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.90
Offset:0
Orientation:forward strand
Alignment:GGAAWTTCCC
GGAAATTCCC
 C T A G A T C G T C G A G C T A C G A T A C G T G A C T T G A C A G T C G A T C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-GGAAWTTCCC-
GGGAAATCCCCN
 A C G T C T A G A T C G T C G A G C T A C G A T A C G T G A C T T G A C A G T C G A T C A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:GGAAWTTCCC
GGAAATTCCC
 C T A G A T C G T C G A G C T A C G A T A C G T G A C T T G A C A G T C G A T C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:GGAAWTTCCC
GGAAATCCCC
 C T A G A T C G T C G A G C T A C G A T A C G T G A C T T G A C A G T C G A T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:GGAAWTTCCC
GGAAANCCCC
 C T A G A T C G T C G A G C T A C G A T A C G T G A C T T G A C A G T C G A T C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GGAAWTTCCC-
AGGGGATTCCCCT
 A C G T A C G T C T A G A T C G T C G A G C T A C G A T A C G T G A C T T G A C A G T C G A T C A C G T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGAAWTTCCC-
GGGGATTCCCCC
 A C G T C T A G A T C G T C G A G C T A C G A T A C G T G A C T T G A C A G T C G A T C A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGAAWTTCCC-
AGGGGAATCCCCT
 A C G T A C G T C T A G A T C G T C G A G C T A C G A T A C G T G A C T T G A C A G T C G A T C A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGAAWTTCCC
NCTGGAATGC---
 A C G T A C G T A C G T C T A G A T C G T C G A G C T A C G A T A C G T G A C T T G A C A G T C G A T C
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGAAWTTCCC
NTGGAATGTN--
 A C G T A C G T C T A G A T C G T C G A G C T A C G A T A C G T G A C T T G A C A G T C G A T C
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T