Information for 10-NNTHTGCATA (Motif 18)

C G T A T A G C G A C T G C T A A C G T A C T G A G T C C G T A C G A T C G T A
Reverse Opposite:
A C G T G C T A A C G T A C T G A G T C C G T A C G A T C T G A A T C G G C A T
p-value:1e-9
log p-value:-2.216e+01
Information Content per bp:1.702
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.29%
Number of Background Sequences with motif177.4
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets59.3 +/- 27.8bp
Average Position of motif in Background50.4 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--NNTHTGCATA-----
AAAATATGCATAATAAA
 A C G T A C G T C G T A T A G C G A C T G C T A A C G T A C T G A G T C C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:NNTHTGCATA-
-ATTTGCATAT
 C G T A T A G C G A C T G C T A A C G T A C T G A G T C C G T A C G A T C G T A A C G T
A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.83
Offset:1
Orientation:forward strand
Alignment:NNTHTGCATA-
-ATTTGCATAA
 C G T A T A G C G A C T G C T A A C G T A C T G A G T C C G T A C G A T C G T A A C G T
A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

POU3F4/MA0789.1/Jaspar

Match Rank:4
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:NNTHTGCATA
-ATTTGCATA
 C G T A T A G C G A C T G C T A A C G T A C T G A G T C C G T A C G A T C G T A
A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--NNTHTGCATA-
TTCATTTGCATAT
 A C G T A C G T C G T A T A G C G A C T G C T A A C G T A C T G A G T C C G T A C G A T C G T A A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---NNTHTGCATA---
TNTAATTTGCATANNN
 A C G T A C G T A C G T C G T A T A G C G A C T G C T A A C G T A C T G A G T C C G T A C G A T C G T A A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---NNTHTGCATA---
TNTAATTTGCATACNA
 A C G T A C G T A C G T C G T A T A G C G A C T G C T A A C G T A C T G A G T C C G T A C G A T C G T A A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---NNTHTGCATA---
TNTAATTTGCATACNA
 A C G T A C G T A C G T C G T A T A G C G A C T G C T A A C G T A C T G A G T C C G T A C G A T C G T A A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

POU5F1B/MA0792.1/Jaspar

Match Rank:9
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:NNTHTGCATA
-ATTTGCATA
 C G T A T A G C G A C T G C T A A C G T A C T G A G T C C G T A C G A T C G T A
A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

POU2F1/MA0785.1/Jaspar

Match Rank:10
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:NNTHTGCATA--
AATTTGCATANT
 C G T A T A G C G A C T G C T A A C G T A C T G A G T C C G T A C G A T C G T A A C G T A C G T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T