Information for 6-TACAGCACTGTGGCCA (Motif 12)

A G C T C G T A A G T C C G T A C A T G A T G C G T C A A G T C A G C T A T C G A C G T A T C G C T A G G T A C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A T G C C G T A T A G C T C G A C T A G C A G T A T C G G A T C A C G T A C T G G C A T C T G A
p-value:1e-10
log p-value:-2.409e+01
Information Content per bp:1.763
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.2 +/- 21.2bp
Average Position of motif in Background54.5 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TACAGCACTGTGGCCA-----
TTCAGCACCATGGACAGCGCC
 A G C T C G T A A G T C C G T A C A T G A T G C G T C A A G T C A G C T A T C G A C G T A T C G C T A G G T A C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TACAGCACTGTGGCCA-----
-TCAGCACCATGGACAGCTCC
 A G C T C G T A A G T C C G T A C A T G A T G C G T C A A G T C A G C T A T C G A C G T A T C G C T A G G T A C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.49
Offset:11
Orientation:reverse strand
Alignment:TACAGCACTGTGGCCA-
-----------TGCCAA
 A G C T C G T A A G T C C G T A C A T G A T G C G T C A A G T C A G C T A T C G A C G T A T C G C T A G G T A C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.49
Offset:-6
Orientation:reverse strand
Alignment:------TACAGCACTGTGGCCA
TCNNTTTACAGCGNNNT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A A G T C C G T A C A T G A T G C G T C A A G T C A G C T A T C G A C G T A T C G C T A G G T A C A G T C C G T A
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T A C G T A C G T A C G T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.49
Offset:-6
Orientation:reverse strand
Alignment:------TACAGCACTGTGGCCA
TCNNTTTACAGCGNNNT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A A G T C C G T A C A T G A T G C G T C A A G T C A G C T A T C G A C G T A T C G C T A G G T A C A G T C C G T A
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:TACAGCACTGTGGCCA
CACAGN----------
 A G C T C G T A A G T C C G T A C A T G A T G C G T C A A G T C A G C T A T C G A C G T A T C G C T A G G T A C A G T C C G T A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.49
Offset:8
Orientation:forward strand
Alignment:TACAGCACTGTGGCCA----
--------ACTAGCCAATCA
 A G C T C G T A A G T C C G T A C A T G A T G C G T C A A G T C A G C T A T C G A C G T A T C G C T A G G T A C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.48
Offset:9
Orientation:forward strand
Alignment:TACAGCACTGTGGCCA--
---------CGTGCCAAG
 A G C T C G T A A G T C C G T A C A T G A T G C G T C A A G T C A G C T A T C G A C G T A T C G C T A G G T A C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.48
Offset:-6
Orientation:reverse strand
Alignment:------TACAGCACTGTGGCCA
TCNCTTTACAGCGNNNT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A A G T C C G T A C A T G A T G C G T C A A G T C A G C T A T C G A C G T A T C G C T A G G T A C A G T C C G T A
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:TACAGCACTGTGGCCA---
---TGGACTTTGNNCTNTG
 A G C T C G T A A G T C C G T A C A T G A T G C G T C A A G T C A G C T A T C G A C G T A T C G C T A G G T A C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G