Information for 2-CTCCAKCCTGCAGCAC (Motif 6)

A G T C A C G T T A G C A G T C C G T A C A G T A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C C G T A A T G C
Reverse Opposite:
A T C G G A C T A C T G A G T C A C G T A C T G A G T C C G T A A C T G A C T G G T A C A C G T A C T G A C T G C G T A A C T G
p-value:1e-10
log p-value:-2.454e+01
Information Content per bp:1.882
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 24.9bp
Average Position of motif in Background89.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTCCAKCCTGCAGCAC
-GGCCYCCTGCTGDGH
 A G T C A C G T T A G C A G T C C G T A C A G T A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C C G T A A T G C
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CTCCAKCCTGCAGCAC---
----TGCCTGCGYCMCCTT
 A G T C A C G T T A G C A G T C C G T A C A G T A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C C G T A A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:3
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTCCAKCCTGCAGCAC
ACCACATCCTGT-----
 A C G T A G T C A C G T T A G C A G T C C G T A C A G T A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C C G T A A T G C
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CTCCAKCCTGCAGCAC
---CCCCCTGCTGTG-
 A G T C A C G T T A G C A G T C C G T A C A G T A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C C G T A A T G C
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTCCAKCCTGCAGCAC
--ACATCCTGNT----
 A G T C A C G T T A G C A G T C C G T A C A G T A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C C G T A A T G C
A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CTCCAKCCTGCAGCAC
----CGCCTCAGGCA-
 A G T C A C G T T A G C A G T C C G T A C A G T A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C C G T A A T G C
A C G T A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CTCCAKCCTGCAGCAC
----AGCCTCAGGCA-
 A G T C A C G T T A G C A G T C C G T A C A G T A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C C G T A A T G C
A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CTCCAKCCTGCAGCAC
------CCTGCTGAGH
 A G T C A C G T T A G C A G T C C G T A C A G T A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CTCCAKCCTGCAGCAC--
---NNTCCTGCTGTGNNN
 A G T C A C G T T A G C A G T C C G T A C A G T A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C C G T A A T G C A C G T A C G T
A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CTCCAKCCTGCAGCAC
----TGCCTGAGGCN-
 A G T C A C G T T A G C A G T C C G T A C A G T A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C C G T A A T G C
A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T