Information for 2-CACAGMCGAT (Motif 8)

G T A C G C T A G T A C G T C A T C A G G T C A A G T C T C A G G T C A A G C T
Reverse Opposite:
C T G A C A G T A G T C T C A G C A G T A G T C A C G T A C T G C G A T C A T G
p-value:1e-11
log p-value:-2.617e+01
Information Content per bp:1.715
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.85%
Number of Background Sequences with motif211.7
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets54.8 +/- 26.4bp
Average Position of motif in Background46.9 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP4/MA0691.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CACAGMCGAT
AACAGCTGAT
 G T A C G C T A G T A C G T C A T C A G G T C A A G T C T C A G G T C A A G C T
T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CACAGMCGAT
CACAGN----
 G T A C G C T A G T A C G T C A T C A G G T C A A G T C T C A G G T C A A G C T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CACAGMCGAT
AACAGCTG--
 G T A C G C T A G T A C G T C A T C A G G T C A A G T C T C A G G T C A A G C T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CACAGMCGAT--
AGCAACAGCCGCACC
 A C G T A C G T A C G T G T A C G C T A G T A C G T C A T C A G G T C A A G T C T C A G G T C A A G C T A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CACAGMCGAT-
-HCAGCTGDTN
 G T A C G C T A G T A C G T C A T C A G G T C A A G T C T C A G G T C A A G C T A C G T
A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CACAGMCGAT
AGAGRRACAGCWGAC
 A C G T A C G T A C G T A C G T A C G T G T A C G C T A G T A C G T C A T C A G G T C A A G T C T C A G G T C A A G C T
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

Tcf21/MA0832.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACAGMCGAT--
GCAACAGCTGTTGT
 A C G T A C G T G T A C G C T A G T A C G T C A T C A G G T C A A G T C T C A G G T C A A G C T A C G T A C G T
T C A G G A T C C T G A G T C A A G T C G T C A A C T G A G T C A C G T A C T G A C G T G A C T T C A G A G C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CACAGMCGAT-
-CCAGACRSVB
 G T A C G C T A G T A C G T C A T C A G G T C A A G T C T C A G G T C A A G C T A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CACAGMCGAT-
-ACAGCTGTTV
 G T A C G C T A G T A C G T C A T C A G G T C A A G T C T C A G G T C A A G C T A C G T
A C G T T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A

MSC/MA0665.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CACAGMCGAT
AACAGCTGTT
 G T A C G C T A G T A C G T C A T C A G G T C A A G T C T C A G G T C A A G C T
C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T