Information for 10-CCCCAGTGGG (Motif 20)

A G T C A G T C A T G C A G T C C T G A T A C G A G C T A C T G C A T G T C A G
Reverse Opposite:
A G T C G T A C A G T C C T G A A T G C G A C T A C T G T A C G C T A G T C A G
p-value:1e-6
log p-value:-1.534e+01
Information Content per bp:1.830
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.10%
Number of Background Sequences with motif213.5
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets44.6 +/- 21.9bp
Average Position of motif in Background49.1 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CCCCAGTGGG
GTCCCCAGGGGA
 A C G T A C G T A G T C A G T C A T G C A G T C C T G A T A C G A G C T A C T G C A T G T C A G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

PB0102.1_Zic2_1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CCCCAGTGGG--
ACCCCCCCGGGGGGN
 A C G T A C G T A C G T A G T C A G T C A T G C A G T C C T G A T A C G A G C T A C T G C A T G T C A G A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CCCCAGTGGG--
CCCCCCCGGGGGNN
 A C G T A C G T A G T C A G T C A T G C A G T C C T G A T A C G A G C T A C T G C A T G T C A G A C G T A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CCCCAGTGGG--
NCCCCCCCGGGGGGN
 A C G T A C G T A C G T A G T C A G T C A T G C A G T C C T G A T A C G A G C T A C T G C A T G T C A G A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCCCAGTGGG--
TGCCCNNAGGGCA
 A C G T A G T C A G T C A T G C A G T C C T G A T A C G A G C T A C T G C A T G T C A G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCCCAGTGGG--
TGCCCTGAGGGCA
 A C G T A G T C A G T C A T G C A G T C C T G A T A C G A G C T A C T G C A T G T C A G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCCCAGTGGG----
TGTTCCCATTGTGTACT
 A C G T A C G T A C G T A G T C A G T C A T G C A G T C C T G A T A C G A G C T A C T G C A T G T C A G A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

PLAG1/MA0163.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCCCAGTGGG----
CCCCCTTGGGCCCC
 A G T C A G T C A T G C A G T C C T G A T A C G A G C T A C T G C A T G T C A G A C G T A C G T A C G T A C G T
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCCCAGTGGG--
TGCCCTGAGGGCA
 A C G T A G T C A G T C A T G C A G T C C T G A T A C G A G C T A C T G C A T G T C A G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCCCAGTGGG-----
DCHCAGCAGGRGGCC
 A G T C A G T C A T G C A G T C C T G A T A C G A G C T A C T G C A T G T C A G A C G T A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C