Information for 5-GCTTCCTCTGCTGCCT (Motif 5)

A T C G A G T C A G C T A G C T A G T C A G T C A C G T A G T C C G A T A C T G A G T C A C G T A C T G A G T C A G T C C G A T
Reverse Opposite:
C G T A A C T G T C A G A G T C C G T A A C T G A G T C C G T A A C T G C G T A A C T G A C T G C T G A C T G A C T A G A T G C
p-value:1e-12
log p-value:-2.859e+01
Information Content per bp:1.857
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.6 +/- 25.8bp
Average Position of motif in Background77.5 +/- 2.5bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myog/MA0500.1/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GCTTCCTCTGCTGCCT
----NNGCAGCTGTC-
 A T C G A G T C A G C T A G C T A G T C A G T C A C G T A G T C C G A T A C T G A G T C A C G T A C T G A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GCTTCCTCTGCTGCCT
----NNGCAGCTGTT-
 A T C G A G T C A G C T A G C T A G T C A G T C A C G T A G T C C G A T A C T G A G T C A C G T A C T G A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GCTTCCTCTGCTGCCT
-------CAGCTGNT-
 A T C G A G T C A G C T A G C T A G T C A G T C A C G T A G T C C G A T A C T G A G T C A C G T A C T G A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GCTTCCTCTGCTGCCT
-------CAGCTGTT-
 A T C G A G T C A G C T A G C T A G T C A G T C A C G T A G T C C G A T A C T G A G T C A C G T A C T G A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCTTCCTCTGCTGCCT
----NAHCAGCTGD--
 A T C G A G T C A G C T A G C T A G T C A G T C A C G T A G T C C G A T A C T G A G T C A C G T A C T G A G T C A G T C C G A T
A C G T A C G T A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GCTTCCTCTGCTGCCT
-----CGCAGCTGCG-
 A T C G A G T C A G C T A G C T A G T C A G T C A C G T A G T C C G A T A C T G A G T C A C G T A C T G A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GCTTCCTCTGCTGCCT
----CAGCAGCTGN--
 A T C G A G T C A G C T A G C T A G T C A G T C A C G T A G T C C G A T A C T G A G T C A C G T A C T G A G T C A G T C C G A T
A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCTTCCTCTGCTGCCT---
--CTCAGCAGCTGCTACTG
 A T C G A G T C A G C T A G C T A G T C A G T C A C G T A G T C C G A T A C T G A G T C A C G T A C T G A G T C A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCTTCCTCTGCTGCCT--
-----TGCAGCTGTCCCT
 A T C G A G T C A G C T A G C T A G T C A G T C A C G T A G T C C G A T A C T G A G T C A C G T A C T G A G T C A G T C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCTTCCTCTGCTGCCT
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G C T A G C T A G T C A G T C A C G T A G T C C G A T A C T G A G T C A C G T A C T G A G T C A G T C C G A T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T