Information for 10-CAATGACAAA (Motif 15)

A G T C C G T A G C T A A G C T A C T G C G T A A G T C C T G A T C G A T C G A
Reverse Opposite:
A G C T A G C T A G C T A C T G A C G T G T A C C T G A C G A T A C G T A C T G
p-value:1e-9
log p-value:-2.150e+01
Information Content per bp:1.841
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif121.4
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets56.9 +/- 24.8bp
Average Position of motif in Background53.0 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CAATGACAAA
--TTGACAG-
 A G T C C G T A G C T A A G C T A C T G C G T A A G T C C T G A T C G A T C G A
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CAATGACAAA
-RHTGWCAR-
 A G T C C G T A G C T A A G C T A C T G C G T A A G T C C T G A T C G A T C G A
A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CAATGACAAA
-CATGAC---
 A G T C C G T A G C T A A G C T A C T G C G T A A G T C C T G A T C G A T C G A
A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CAATGACAAA
CAAGGHCANV
 A G T C C G T A G C T A A G C T A C T G C G T A A G T C C T G A T C G A T C G A
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CAATGACAAA---
AAAAATAACAAACGG
 A C G T A C G T A G T C C G T A G C T A A G C T A C T G C G T A A G T C C T G A T C G A T C G A A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0032.1_IRC900814_1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CAATGACAAA----
ATTTACGACAAATAGC
 A C G T A C G T A G T C C G T A G C T A A G C T A C T G C G T A A G T C C T G A T C G A T C G A A C G T A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CAATGACAAA
--TTGACAGG
 A G T C C G T A G C T A A G C T A C T G C G T A A G T C C T G A T C G A T C G A
A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

PB0108.1_Atf1_2/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAATGACAAA----
GAATGACGAATAAC
 A G T C C G T A G C T A A G C T A C T G C G T A A G T C C T G A T C G A T C G A A C G T A C G T A C G T A C G T
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAATGACAAA
NTCAAGGTCA--
 A C G T A C G T A G T C C G T A G C T A A G C T A C T G C G T A A G T C C T G A T C G A T C G A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAATGACAAA
BTCAAGGTCA--
 A C G T A C G T A G T C C G T A G C T A A G C T A C T G C G T A A G T C C T G A T C G A T C G A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T