Information for 6-GCTCCCTGSAGGG (Motif 8)

A T C G A G T C A C G T T A G C A G T C G T A C A G C T A C T G T A C G C G T A A C T G T C A G A C T G
Reverse Opposite:
T G A C A G T C A G T C G C A T A T G C G T A C C T G A A C T G C T A G A C T G G T C A A C T G T A G C
p-value:1e-14
log p-value:-3.370e+01
Information Content per bp:1.730
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.68%
Number of Background Sequences with motif135.7
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets53.4 +/- 20.2bp
Average Position of motif in Background51.2 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.73
Offset:-7
Orientation:forward strand
Alignment:-------GCTCCCTGSAGGG
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C G T T A G C A G T C G T A C A G C T A C T G T A C G C G T A A C T G T C A G A C T G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCTCCCTGSAGGG-
GGCCYCCTGCTGDGH
 A C G T A T C G A G T C A C G T T A G C A G T C G T A C A G C T A C T G T A C G C G T A A C T G T C A G A C T G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GCTCCCTGSAGGG
-CCCCCTGCTGTG
 A T C G A G T C A C G T T A G C A G T C G T A C A G C T A C T G T A C G C G T A A C T G T C A G A C T G
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GCTCCCTGSAGGG--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A T C G A G T C A C G T T A G C A G T C G T A C A G C T A C T G T A C G C G T A A C T G T C A G A C T G A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GCTCCCTGSAGGG--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C G T T A G C A G T C G T A C A G C T A C T G T A C G C G T A A C T G T C A G A C T G A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCTCCCTGSAGGG-
GACCCCCCGCTGTGC
 A C G T A T C G A G T C A C G T T A G C A G T C G T A C A G C T A C T G T A C G C G T A A C T G T C A G A C T G A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCTCCCTGSAGGG
GCTCCG-------
 A T C G A G T C A C G T T A G C A G T C G T A C A G C T A C T G T A C G C G T A A C T G T C A G A C T G
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCCTGSAGGG-
ACCCCCCCGGGGGGN
 A C G T A T C G A G T C A C G T T A G C A G T C G T A C A G C T A C T G T A C G C G T A A C T G T C A G A C T G A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCCTGSAGGG-
NCCCCCCCGGGGGGN
 A C G T A T C G A G T C A C G T T A G C A G T C G T A C A G C T A C T G T A C G C G T A A C T G T C A G A C T G A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCTCCCTGSAGGG
CACCCCCGGGGGGG
 A C G T A T C G A G T C A C G T T A G C A G T C G T A C A G C T A C T G T A C G C G T A A C T G T C A G A C T G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G