Information for 3-CCACCCACTGGGCAAT (Motif 5)

A G T C A G T C G T C A A T G C G A T C A G T C G T C A A G T C A G C T C T A G C A T G T A C G T G A C G T C A T C G A C A G T
Reverse Opposite:
G T C A A G C T A C G T A C T G A T G C G A T C G A T C C T G A A C T G A C G T A C T G C A T G A T C G C A G T A C T G C T A G
p-value:1e-16
log p-value:-3.914e+01
Information Content per bp:1.753
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.9 +/- 19.0bp
Average Position of motif in Background59.8 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCACCCACTGGGCAAT
GGACCACCCACG-------
 A C G T A C G T A C G T A G T C A G T C G T C A A T G C G A T C A G T C G T C A A G T C A G C T C T A G C A T G T A C G T G A C G T C A T C G A C A G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCACCCACTGGGCAAT
YCCGCCCACGCN-----
 A C G T A G T C A G T C G T C A A T G C G A T C A G T C G T C A A G T C A G C T C T A G C A T G T A C G T G A C G T C A T C G A C A G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCACCCACTGGGCAAT
GACCCCCCGCTGTGC---
 A C G T A C G T A G T C A G T C G T C A A T G C G A T C A G T C G T C A A G T C A G C T C T A G C A T G T A C G T G A C G T C A T C G A C A G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCACCCACTGGGCAAT
GACCCCCCGCTGCGC---
 A C G T A C G T A G T C A G T C G T C A A T G C G A T C A G T C G T C A A G T C A G C T C T A G C A T G T A C G T G A C G T C A T C G A C A G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCACCCACTGGGCAAT
GCCMCGCCCMCY-------
 A C G T A C G T A C G T A G T C A G T C G T C A A T G C G A T C A G T C G T C A A G T C A G C T C T A G C A T G T A C G T G A C G T C A T C G A C A G T
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF740/MA0753.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCACCCACTGGGCAAT
CCCCCCCCAC--------
 A C G T A C G T A G T C A G T C G T C A A T G C G A T C A G T C G T C A A G T C A G C T C T A G C A T G T A C G T G A C G T C A T C G A C A G T
T G A C G T A C G T A C G A T C G A T C A G T C T G A C G T A C G T C A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCACCCACTGGGCAAT-
-CAATCACTGGCAGAAT
 A G T C A G T C G T C A A T G C G A T C A G T C G T C A A G T C A G C T C T A G C A T G T A C G T G A C G T C A T C G A C A G T A C G T
A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCACCCACTGGGCAAT
GCTCCGCCCMCY-------
 A C G T A C G T A C G T A G T C A G T C G T C A A T G C G A T C A G T C G T C A A G T C A G C T C T A G C A T G T A C G T G A C G T C A T C G A C A G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCACCCACTGGGCAAT
GACCCCCCGCTGTG----
 A C G T A C G T A G T C A G T C G T C A A T G C G A T C A G T C G T C A A G T C A G C T C T A G C A T G T A C G T G A C G T C A T C G A C A G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CCACCCACTGGGCAAT
----WDNCTGGGCA--
 A G T C A G T C G T C A A T G C G A T C A G T C G T C A A G T C A G C T C T A G C A T G T A C G T G A C G T C A T C G A C A G T
A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T