Information for 11-AACAGACGCC (Motif 23)

C T G A T G C A A G T C C T G A A T C G C G T A G A T C A C T G A G T C A G T C
Reverse Opposite:
C T A G A C T G A G T C C T A G A C G T A T G C A G C T A C T G A C G T A G C T
p-value:1e-9
log p-value:-2.209e+01
Information Content per bp:1.857
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif91.2
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets40.3 +/- 24.4bp
Average Position of motif in Background52.9 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AACAGACGCC--
AGCAACAGCCGCACC
 A C G T A C G T A C G T C T G A T G C A A G T C C T G A A T C G C G T A G A T C A C T G A G T C A G T C A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AACAGACGCC-
-CCAGACRSVB
 C T G A T G C A A G T C C T G A A T C G C G T A G A T C A C T G A G T C A G T C A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AACAGACGCC
AACAGATGGT
 C T G A T G C A A G T C C T G A A T C G C G T A G A T C A C T G A G T C A G T C
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AACAGACGCC
AACAGATGGC
 C T G A T G C A A G T C C T G A A T C G C G T A G A T C A C T G A G T C A G T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

PB0143.1_Klf7_2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AACAGACGCC------
AAGCATACGCCCAACTT
 A C G T C T G A T G C A A G T C C T G A A T C G C G T A G A T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AACAGACGCC
AACAKATGGY
 C T G A T G C A A G T C C T G A A T C G C G T A G A T C A C T G A G T C A G T C
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

NEUROG2/MA0669.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AACAGACGCC
AACATATGTC
 C T G A T G C A A G T C C T G A A T C G C G T A G A T C A C T G A G T C A G T C
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AACAGACGCC
-CCAGACAG-
 C T G A T G C A A G T C C T G A A T C G C G T A G A T C A C T G A G T C A G T C
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AACAGACGCC--
GAAGAACAGGTGTCCG
 A C G T A C G T A C G T A C G T C T G A T G C A A G T C C T G A A T C G C G T A G A T C A C T G A G T C A G T C A C G T A C G T
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AACAGACGCC
NHAACBGYYV--
 A C G T A C G T C T G A T G C A A G T C C T G A A T C G C G T A G A T C A C T G A G T C A G T C
A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A A C G T A C G T