Information for 22-GRCTCTRAATGAC (Motif 21)

A C T G T C G A A G T C A C G T A G T C A C G T C T A G C G T A C G T A A C G T C T A G T G C A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A A C G T A C G T A G T C C G T A A C T G C G T A T A C G A G C T A G T C
p-value:1e-10
log p-value:-2.314e+01
Information Content per bp:1.884
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.7 +/- 20.7bp
Average Position of motif in Background47.2 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GRCTCTRAATGAC
GNCTATAAAAGG-
 A C T G T C G A A G T C A C G T A G T C A C G T C T A G C G T A C G T A A C G T C T A G T G C A A G T C
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GRCTCTRAATGAC---
----BTGABTGACAGS
 A C T G T C G A A G T C A C G T A G T C A C G T C T A G C G T A C G T A A C G T C T A G T G C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:3
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GRCTCTRAATGAC
-------CATGAC
 A C T G T C G A A G T C A C G T A G T C A C G T C T A G C G T A C G T A A C G T C T A G T G C A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GRCTCTRAATGAC----
-ACTATGAATGAATGAT
 A C T G T C G A A G T C A C G T A G T C A C G T C T A G C G T A C G T A A C G T C T A G T G C A A G T C A C G T A C G T A C G T A C G T
A C G T G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

Hoxc9/MA0485.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GRCTCTRAATGAC
GGCCATAAATCAC
 A C T G T C G A A G T C A C G T A G T C A C G T C T A G C G T A C G T A A C G T C T A G T G C A A G T C
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GRCTCTRAATGAC---
----NTGATTGACAGN
 A C T G T C G A A G T C A C G T A G T C A C G T C T A G C G T A C G T A A C G T C T A G T G C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GRCTCTRAATGAC
AGGTCTCTAACC---
 A C G T A C G T A C T G T C G A A G T C A C G T A G T C A C G T C T A G C G T A C G T A A C G T C T A G T G C A A G T C
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T A C G T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GRCTCTRAATGAC----
-NNAATTAATGACCNNN
 A C T G T C G A A G T C A C G T A G T C A C G T C T A G C G T A C G T A A C G T C T A G T G C A A G T C A C G T A C G T A C G T A C G T
A C G T T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

BARHL2/MA0635.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GRCTCTRAATGAC
---GCTAAACGGT
 A C T G T C G A A G T C A C G T A G T C A C G T C T A G C G T A C G T A A C G T C T A G T G C A A G T C
A C G T A C G T A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GRCTCTRAATGAC
GGCCATAAATCA-
 A C T G T C G A A G T C A C G T A G T C A C G T C T A G C G T A C G T A A C G T C T A G T G C A A G T C
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T