Information for 14-TTTGTTAGCACGA (Motif 16)

C G A T A G C T A C G T A C T G A C G T A C G T C G T A A T C G A G T C G T C A T A G C C T A G C G T A
Reverse Opposite:
A C G T A G T C A T C G C A G T A C T G A T G C A C G T C G T A C G T A A G T C C G T A C T G A C G T A
p-value:1e-10
log p-value:-2.489e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.4 +/- 20.9bp
Average Position of motif in Background54.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTTAGCACGA
NCNTTTGTTATTTNN-
 A C G T A C G T A C G T C G A T A G C T A C G T A C T G A C G T A C G T C G T A A T C G A G T C G T C A T A G C C T A G C G T A
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTTGTTAGCACGA
ATTGTT-------
 C G A T A G C T A C G T A C T G A C G T A C G T C G T A A T C G A G T C G T C A T A G C C T A G C G T A
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TTTGTTAGCACGA
CTATAATTGTTAGCG---
 A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C G T A C T G A C G T A C G T C G T A A T C G A G T C G T C A T A G C C T A G C G T A
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTGTTAGCACGA
ATTGTTTAN----
 C G A T A G C T A C G T A C T G A C G T A C G T C G T A A T C G A G T C G T C A T A G C C T A G C G T A
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TTTGTTAGCACGA
TNNTCCTTTGTTCTNNT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C G T A C T G A C G T A C G T C G T A A T C G A G T C G T C A T A G C C T A G C G T A
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTTGTTAGCACGA
ATTGTTA------
 C G A T A G C T A C G T A C T G A C G T A C G T C G T A A T C G A G T C G T C A T A G C C T A G C G T A
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTTGTTAGCACGA
CCATTGTTNY-----
 A C G T A C G T C G A T A G C T A C G T A C T G A C G T A C G T C G T A A T C G A G T C G T C A T A G C C T A G C G T A
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTTAGCACGA-
NNNTTAGTTAACTNANN
 A C G T A C G T A C G T C G A T A G C T A C G T A C T G A C G T A C G T C G T A A T C G A G T C G T C A T A G C C T A G C G T A A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTTGTTAGCACGA
CCWTTGTYYB-----
 A C G T A C G T C G A T A G C T A C G T A C T G A C G T A C G T C G T A A T C G A G T C G T C A T A G C C T A G C G T A
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTTGTTAGCACGA--
TGATTGTTAACAGTTGG
 A C G T A C G T C G A T A G C T A C G T A C T G A C G T A C G T C G T A A T C G A G T C G T C A T A G C C T A G C G T A A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G