Information for 8-CTCTCAGTAG (Motif 14)

A G T C A G C T A G T C G C A T A G T C C T G A A C T G G C A T C G T A C A T G
Reverse Opposite:
G T A C G C A T C G T A G T A C A G C T C T A G C G T A A C T G C T G A A C T G
p-value:1e-11
log p-value:-2.556e+01
Information Content per bp:1.834
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif84.2
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets47.8 +/- 30.1bp
Average Position of motif in Background50.3 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CTCTCAGTAG-
ACCACTCTCGGTCAC
 A C G T A C G T A C G T A C G T A G T C A G C T A G T C G C A T A G T C C T G A A C T G G C A T C G T A C A T G A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTCTCAGTAG-
AGTATTCTCGGTTGC
 A C G T A C G T A C G T A C G T A G T C A G C T A G T C G C A T A G T C C T G A A C T G G C A T C G T A C A T G A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCAGTAG-
NNAATTCTCGNTNAN
 A C G T A C G T A C G T A C G T A G T C A G C T A G T C G C A T A G T C C T G A A C T G G C A T C G T A C A T G A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTCTCAGTAG----
CCACACAGCAGGAGA
 A C G T A G T C A G C T A G T C G C A T A G T C C T G A A C T G G C A T C G T A C A T G A C G T A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTCTCAGTAG-
-DCTCAGCAGG
 A G T C A G C T A G T C G C A T A G T C C T G A A C T G G C A T C G T A C A T G A C G T
A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCTCAGTAG----
CCACACAGCAGGAGA
 A C G T A G T C A G C T A G T C G C A T A G T C C T G A A C T G G C A T C G T A C A T G A C G T A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTCTCAGTAG
AGCCACTCAAG--
 A C G T A C G T A C G T A G T C A G C T A G T C G C A T A G T C C T G A A C T G G C A T C G T A C A T G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCTCAGTAG-----
ATTTACAGTAGCAAAA
 A C G T A G T C A G C T A G T C G C A T A G T C C T G A A C T G G C A T C G T A C A T G A C G T A C G T A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTCTCAGTAG
AASCACTCAA---
 A C G T A C G T A C G T A G T C A G C T A G T C G C A T A G T C C T G A A C T G G C A T C G T A C A T G
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTCTCAGTAG----
--CACAGCAGGGGG
 A G T C A G C T A G T C G C A T A G T C C T G A A C T G G C A T C G T A C A T G A C G T A C G T A C G T A C G T
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G