Information for 9-CGGCCGGMGCCTCTCC (Motif 13)

A T G C A C T G C T A G A G T C A T G C A T C G A T C G G T C A A C T G A G T C A G T C A C G T A G T C G A C T A G T C A G T C
Reverse Opposite:
A C T G A C T G C T G A T A C G C G T A C T A G A C T G A G T C A C G T A T G C A T G C T A C G T C A G A G T C A G T C A T C G
p-value:1e-10
log p-value:-2.305e+01
Information Content per bp:1.811
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.0 +/- 25.5bp
Average Position of motif in Background49.4 +/- 36.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGGCCGGMGCCTCTCC
GGGGCCGAGGCCTG---
 A C G T A T G C A C T G C T A G A G T C A T G C A T C G A T C G G T C A A C T G A G T C A G T C A C G T A G T C G A C T A G T C A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CGGCCGGMGCCTCTCC
----CGGAGC------
 A T G C A C T G C T A G A G T C A T G C A T C G A T C G G T C A A C T G A G T C A G T C A C G T A G T C G A C T A G T C A G T C
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGGCCGGMGCCTCTCC
GGGCGGGACC------
 A T G C A C T G C T A G A G T C A T G C A T C G A T C G G T C A A C T G A G T C A G T C A C G T A G T C G A C T A G T C A G T C
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CGGCCGGMGCCTCTCC
---AGCGCGCC-----
 A T G C A C T G C T A G A G T C A T G C A T C G A T C G G T C A A C T G A G T C A G T C A C G T A G T C G A C T A G T C A G T C
A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCGGMGCCTCTCC
GGGGGCGGGGCC-----
 A C G T A T G C A C T G C T A G A G T C A T G C A T C G A T C G G T C A A C T G A G T C A G T C A C G T A G T C G A C T A G T C A G T C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--CGGCCGGMGCCTCTCC
RGKGGGCGGAGC------
 A C G T A C G T A T G C A C T G C T A G A G T C A T G C A T C G A T C G G T C A A C T G A G T C A G T C A C G T A G T C G A C T A G T C A G T C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.49
Offset:8
Orientation:forward strand
Alignment:CGGCCGGMGCCTCTCC--
--------GCCCCGCCCC
 A T G C A C T G C T A G A G T C A T G C A T C G A T C G G T C A A C T G A G T C A G T C A C G T A G T C G A C T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.48
Offset:8
Orientation:reverse strand
Alignment:CGGCCGGMGCCTCTCC--
--------GCCMCRCCCH
 A T G C A C T G C T A G A G T C A T G C A T C G A T C G G T C A A C T G A G T C A G T C A C G T A G T C G A C T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-CGGCCGGMGCCTCTCC
ADGGYAGYAGCATCT--
 A C G T A T G C A C T G C T A G A G T C A T G C A T C G A T C G G T C A A C T G A G T C A G T C A C G T A G T C G A C T A G T C A G T C
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.47
Offset:6
Orientation:forward strand
Alignment:CGGCCGGMGCCTCTCC
------GGGGATTTCC
 A T G C A C T G C T A G A G T C A T G C A T C G A T C G G T C A A C T G A G T C A G T C A C G T A G T C G A C T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C