Information for 1-AGGTCYCTAAMCM (Motif 1)

C T G A C T A G A C T G C A G T A G T C G A T C A G T C A C G T G C T A G T C A G T A C G A T C G T A C
Reverse Opposite:
C A T G C T A G C A T G C A G T C A G T C G T A C T A G C T A G C T A G G T C A T G A C A G T C G A C T
p-value:1e-88
log p-value:-2.040e+02
Information Content per bp:1.659
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif10.89%
Number of Background Sequences with motif185.7
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets52.1 +/- 25.7bp
Average Position of motif in Background50.9 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:forward strand
Alignment:AGGTCYCTAAMCM
AGGTCTCTAACC-
 C T G A C T A G A C T G C A G T A G T C G A T C A G T C A C G T G C T A G T C A G T A C G A T C G T A C
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGGTCYCTAAMCM
RGGGCACTAACY-
 C T G A C T A G A C T G C A G T A G T C G A T C A G T C A C G T G C T A G T C A G T A C G A T C G T A C
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGGTCYCTAAMCM
NAGGTCANTGACCT
 A C G T C T G A C T A G A C T G C A G T A G T C G A T C A G T C A C G T G C T A G T C A G T A C G A T C G T A C
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

PH0073.1_Hoxc9/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGGTCYCTAAMCM-
GGAGGTCATTAATTAT
 A C G T A C G T C T G A C T A G A C T G C A G T A G T C G A T C A G T C A C G T G C T A G T C A G T A C G A T C G T A C A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGGTCYCTAAMCM
AGGTCA-------
 C T G A C T A G A C T G C A G T A G T C G A T C A G T C A C G T G C T A G T C A G T A C G A T C G T A C
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGGTCYCTAAMCM
NRRGGGTCTT------
 A C G T A C G T A C G T C T G A C T A G A C T G C A G T A G T C G A T C A G T C A C G T G C T A G T C A G T A C G A T C G T A C
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGGTCYCTAAMCM
AAGGTCAC------
 A C G T C T G A C T A G A C T G C A G T A G T C G A T C A G T C A C G T G C T A G T C A G T A C G A T C G T A C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGGTCYCTAAMCM-
NTNNCGTATCCAAGTNN
 A C G T A C G T A C G T C T G A C T A G A C T G C A G T A G T C G A T C A G T C A C G T G C T A G T C A G T A C G A T C G T A C A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGGTCYCTAAMCM
AGRGGTCA-------
 A C G T A C G T C T G A C T A G A C T G C A G T A G T C G A T C A G T C A C G T G C T A G T C A G T A C G A T C G T A C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGGTCYCTAAMCM
TRAGGTCA-------
 A C G T A C G T C T G A C T A G A C T G C A G T A G T C G A T C A G T C A C G T G C T A G T C A G T A C G A T C G T A C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T