Information for 7-CCCTTTGTTCTCC (Motif 9)

A T G C A T G C A G T C A C G T A C G T A C G T A T C G A C G T A C G T A G T C A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C T G C G T A C G T A A T G C C G T A C G T A C G T A A C T G A T C G A T C G
p-value:1e-10
log p-value:-2.507e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 26.6bp
Average Position of motif in Background39.9 +/- 6.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---CCCTTTGTTCTCC-
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A T G C A T G C A G T C A C G T A C G T A C G T A T C G A C G T A C G T A G T C A C G T A G T C A G T C A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CCCTTTGTTCTCC
-YCTTTGTTCC--
 A T G C A T G C A G T C A C G T A C G T A C G T A T C G A C G T A C G T A G T C A C G T A G T C A G T C
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CCCTTTGTTCTCC
-CCTTTGTTTT--
 A T G C A T G C A G T C A C G T A C G T A C G T A T C G A C G T A C G T A G T C A C G T A G T C A G T C
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---CCCTTTGTTCTCC-
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A T G C A T G C A G T C A C G T A C G T A C G T A T C G A C G T A C G T A G T C A C G T A G T C A G T C A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CCCTTTGTTCTCC
NCCATTGTTC---
 A T G C A T G C A G T C A C G T A C G T A C G T A T C G A C G T A C G T A G T C A C G T A G T C A G T C
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CCCTTTGTTCTCC
-CCATTGTTTT--
 A T G C A T G C A G T C A C G T A C G T A C G T A T C G A C G T A C G T A G T C A C G T A G T C A G T C
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CCCTTTGTTCTCC
AACCCTTTGATCTTT
 A C G T A C G T A T G C A T G C A G T C A C G T A C G T A C G T A T C G A C G T A C G T A G T C A C G T A G T C A G T C
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CCCTTTGTTCTCC
-CCTTTGTT----
 A T G C A T G C A G T C A C G T A C G T A C G T A T C G A C G T A C G T A G T C A C G T A G T C A G T C
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CCCTTTGTTCTCC
-CCWTTGTYYB--
 A T G C A T G C A G T C A C G T A C G T A C G T A T C G A C G T A C G T A G T C A C G T A G T C A G T C
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTTGTTCTCC
TNCCTTTGATGT--
 A C G T A T G C A T G C A G T C A C G T A C G T A C G T A T C G A C G T A C G T A G T C A C G T A G T C A G T C
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T