Information for 4-CAGACAGGAGCAC (Motif 5)

A G T C C G T A A T C G C G T A A G T C C G T A A C T G T A C G G T C A A C T G A G T C C G T A A T G C
Reverse Opposite:
A T C G A C G T A C T G A G T C A C G T A G T C A G T C A C G T A C T G A C G T A T G C A C G T A C T G
p-value:1e-13
log p-value:-3.052e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.3 +/- 22.9bp
Average Position of motif in Background59.1 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CAGACAGGAGCAC
CCAGACAG------
 A C G T A G T C C G T A A T C G C G T A A G T C C G T A A C T G T A C G G T C A A C T G A G T C C G T A A T G C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------CAGACAGGAGCAC
CAAATCCAGACATCACA--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G C G T A A G T C C G T A A C T G T A C G G T C A A C T G A G T C C G T A A T G C
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CAGACAGGAGCAC--
ATTTACAGTAGCAAAA
 A C G T A G T C C G T A A T C G C G T A A G T C C G T A A C T G T A C G G T C A A C T G A G T C C G T A A T G C A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CAGACAGGAGCAC
CCAGACRSVB----
 A C G T A G T C C G T A A T C G C G T A A G T C C G T A A C T G T A C G G T C A A C T G A G T C C G T A A T G C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAGACAGGAGCAC--
ATGTACAGTAGCAAAG
 A C G T A G T C C G T A A T C G C G T A A G T C C G T A A C T G T A C G G T C A A C T G A G T C C G T A A T G C A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAGACAGGAGCAC-
AGCAACAGCCGCACC
 A C G T A G T C C G T A A T C G C G T A A G T C C G T A A C T G T A C G G T C A A C T G A G T C C G T A A T G C A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CAGACAGGAGCAC--
-----GGGAGGACNG
 A G T C C G T A A T C G C G T A A G T C C G T A A C T G T A C G G T C A A C T G A G T C C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGACAGGAGCAC
BCAGACWA------
 A C G T A G T C C G T A A T C G C G T A A G T C C G T A A C T G T A C G G T C A A C T G A G T C C G T A A T G C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAGACAGGAGCAC
--CACAGN-----
 A G T C C G T A A T C G C G T A A G T C C G T A A C T G T A C G G T C A A C T G A G T C C G T A A T G C
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAGACAGGAGCAC
--GACAGGTGTN-
 A G T C C G T A A T C G C G T A A G T C C G T A A C T G T A C G G T C A A C T G A G T C C G T A A T G C
A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T