Information for 3-TAGCAGCAGCTCA (Motif 4)

A C G T C T G A A C T G A G T C C G T A C T A G G T A C C G T A A C T G A G T C A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G A G T C A C G T A C T G A G T C A C G T A C T G A G T C A G C T T C G A
p-value:1e-13
log p-value:-3.163e+01
Information Content per bp:1.905
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.6 +/- 13.6bp
Average Position of motif in Background65.0 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TAGCAGCAGCTCA
ADGGYAGYAGCATCT--
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G A G T C C G T A C T A G G T A C C G T A A C T G A G T C A C G T A G T C C G T A
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TAGCAGCAGCTCA
-AGCAGCTGCT--
 A C G T C T G A A C T G A G T C C G T A C T A G G T A C C G T A A C T G A G T C A C G T A G T C C G T A
A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TAGCAGCAGCTCA-
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T C T G A A C T G A G T C C G T A C T A G G T A C C G T A A C T G A G T C A C G T A G T C C G T A A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TAGCAGCAGCTCA
-AGCAGCTGCTNN
 A C G T C T G A A C T G A G T C C G T A C T A G G T A C C G T A A C T G A G T C A C G T A G T C C G T A
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TAGCAGCAGCTCA
---CAGCTGNT--
 A C G T C T G A A C T G A G T C C G T A C T A G G T A C C G T A A C T G A G T C A C G T A G T C C G T A
A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TAGCAGCAGCTCA
-CGCAGCTGCG--
 A C G T C T G A A C T G A G T C C G T A C T A G G T A C C G T A A C T G A G T C A C G T A G T C C G T A
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TAGCAGCAGCTCA
--NCAGCTGCTG-
 A C G T C T G A A C T G A G T C C G T A C T A G G T A C C G T A A C T G A G T C A C G T A G T C C G T A
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TAGCAGCAGCTCA-
----AACAGCTGAT
 A C G T C T G A A C T G A G T C C G T A C T A G G T A C C G T A A C T G A G T C A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TAGCAGCAGCTCA-
-NGNGACAGCTGCN
 A C G T C T G A A C T G A G T C C G T A C T A G G T A C C G T A A C T G A G T C A C G T A G T C C G T A A C G T
A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TAGCAGCAGCTCA
----AACAGCTG-
 A C G T C T G A A C T G A G T C C G T A C T A G G T A C C G T A A C T G A G T C A C G T A G T C C G T A
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T