Information for 1-ATGTGGATTS (Motif 1)

C T G A C G A T A C T G A C G T A C T G A C T G C G T A A C G T A C G T A T C G
Reverse Opposite:
T A G C C G T A C G T A A C G T G T A C A G T C C G T A A G T C C G T A G A C T
p-value:1e-36
log p-value:-8.318e+01
Information Content per bp:1.836
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif4.68%
Number of Background Sequences with motif115.0
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets50.9 +/- 21.7bp
Average Position of motif in Background49.9 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.98
Offset:1
Orientation:reverse strand
Alignment:ATGTGGATTS--
-TGTGGATTNNN
 C T G A C G A T A C T G A C G T A C T G A C T G C G T A A C G T A C G T A T C G A C G T A C G T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-ATGTGGATTS-
NNTGTGGATTSS
 A C G T C T G A C G A T A C T G A C G T A C T G A C T G C G T A A C G T A C G T A T C G A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:ATGTGGATTS
--GTGGAT--
 C T G A C G A T A C T G A C G T A C T G A C T G C G T A A C G T A C G T A T C G
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-ATGTGGATTS
NNTGTGGTTT-
 A C G T C T G A C G A T A C T G A C G T A C T G A C T G C G T A A C G T A C G T A T C G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--ATGTGGATTS
GTCTGTGGTTT-
 A C G T A C G T C T G A C G A T A C T G A C G T A C T G A C T G C G T A A C G T A C G T A T C G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ATGTGGATTS
CTGTGGTTTN
 C T G A C G A T A C T G A C G T A C T G A C T G C G T A A C G T A C G T A T C G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ATGTGGATTS
NNHTGTGGTTWN
 A C G T A C G T C T G A C G A T A C T G A C G T A C T G A C T G C G T A A C G T A C G T A T C G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ATGTGGATTS
GCTGTGGTTT-
 A C G T C T G A C G A T A C T G A C G T A C T G A C T G C G T A A C G T A C G T A T C G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

PH0015.1_Crx/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATGTGGATTS----
CGTTGGGGATTAGCCT
 A C G T A C G T C T G A C G A T A C T G A C G T A C T G A C T G C G T A A C G T A C G T A T C G A C G T A C G T A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

Foxq1/MA0040.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATGTGGATTS
TATTGTTTATT-
 A C G T A C G T C T G A C G A T A C T G A C G T A C T G A C T G C G T A A C G T A C G T A T C G
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T