Information for 1-GGGCGCCTTT (Motif 5)

T C A G A T C G A T C G G T A C A T C G A T G C T G A C A G C T G C A T A C G T
Reverse Opposite:
T G C A C G T A C T G A A C T G T A C G T A G C C A T G T A G C T A G C A G T C
p-value:1e-12
log p-value:-2.888e+01
Information Content per bp:1.675
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif7.02%
Number of Background Sequences with motif1143.7
Percentage of Background Sequences with motif2.50%
Average Position of motif in Targets53.3 +/- 25.2bp
Average Position of motif in Background49.0 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0008.1_E2F2_1/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---GGGCGCCTTT--
NTCGCGCGCCTTNNN
 A C G T A C G T A C G T T C A G A T C G A T C G G T A C A T C G A T G C T G A C A G C T G C A T A C G T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GGGCGCCTTT--
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T T C A G A T C G A T C G G T A C A T C G A T G C T G A C A G C T G C A T A C G T A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

E2F3/MA0469.2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCGCCTTT---
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T A C G T A C G T T C A G A T C G A T C G G T A C A T C G A T G C T G A C A G C T G C A T A C G T A C G T A C G T A C G T
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GGGCGCCTTT--
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T A C G T T C A G A T C G A T C G G T A C A T C G A T G C T G A C A G C T G C A T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGGCGCCTTT
AGCGCGCC---
 A C G T T C A G A T C G A T C G G T A C A T C G A T G C T G A C A G C T G C A T A C G T
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGCCTTT
TTTGGCGCCAAA
 A C G T A C G T T C A G A T C G A T C G G T A C A T C G A T G C T G A C A G C T G C A T A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

E2F2/MA0864.1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGCCTTT--
AAAATGGCGCCATTTT
 A C G T A C G T A C G T A C G T T C A G A T C G A T C G G T A C A T C G A T G C T G A C A G C T G C A T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T

PB0143.1_Klf7_2/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCGCCTTT--
NNNTNGGGCGTATNNTN
 A C G T A C G T A C G T A C G T A C G T T C A G A T C G A T C G G T A C A T C G A T G C T G A C A G C T G C A T A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGGCGCCTTT----
NNGCACCTTTCTCC
 T C A G A T C G A T C G G T A C A T C G A T G C T G A C A G C T G C A T A C G T A C G T A C G T A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

YY2/MA0748.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGGCGCCTTT-
GTCCGCCATTA
 T C A G A T C G A T C G G T A C A T C G A T G C T G A C A G C T G C A T A C G T A C G T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A