Information for 7-TTTWTTKTCATGC (Motif 9)

A C G T A G C T A C G T C G A T A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T C T A G G T C A G T A C C G T A C G T A C G T A C G T A C T G A G T C A
p-value:1e-11
log p-value:-2.677e+01
Information Content per bp:1.910
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.7 +/- 21.5bp
Average Position of motif in Background65.5 +/- 8.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTTWTTKTCATGC-
TTTTTTTTCNNGTN
 A C G T A G C T A C G T C G A T A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TTTWTTKTCATGC----
--CTTTGTTATGCAAAT
 A C G T A G C T A C G T C G A T A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

PB0182.1_Srf_2/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTTWTTKTCATGC
NNNNTTTTTTTTTNAAC
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G A T A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A G T C
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTTWTTKTCATGC----
--CATTGTTATGCAAAT
 A C G T A G C T A C G T C G A T A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TTTWTTKTCATGC
------GTCATN-
 A C G T A G C T A C G T C G A T A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTTWTTKTCATGC
NTTATTCGTCATNC
 A C G T A C G T A G C T A C G T C G A T A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A G T C
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C

PB0116.1_Elf3_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTTWTTKTCATGC
GNATTTTTTTTTTGANC
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G A T A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A G T C
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TTTWTTKTCATGC
-----AGTCACGC
 A C G T A G C T A C G T C G A T A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

Foxk1/MA0852.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTTWTTKTCATGC-
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T A C G T A G C T A C G T C G A T A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0018.1_Foxk1_1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTTWTTKTCATGC-
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T A C G T A G C T A C G T C G A T A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T