Information for 1-CCACTAGGTGGCA (Motif 1)

A G T C A G T C C G T A A G T C G A C T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C T G A
Reverse Opposite:
A G C T A C T G A G T C A G T C G T C A A G T C A G T C A C G T C T G A A C T G A C G T A C T G A C T G
p-value:1e-76
log p-value:-1.765e+02
Information Content per bp:1.879
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif9.04%
Number of Background Sequences with motif178.6
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets51.9 +/- 26.1bp
Average Position of motif in Background49.7 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.92
Offset:-3
Orientation:reverse strand
Alignment:---CCACTAGGTGGCA----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C G A C T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C T G A A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.91
Offset:-3
Orientation:forward strand
Alignment:---CCACTAGGTGGCA---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C G A C T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C T G A A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-CCACTAGGTGGCA------
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A G T C C G T A A G T C G A C T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCACTAGGTGGCA-----
-NNNAAGGGGGCGGGNNN
 A G T C A G T C C G T A A G T C G A C T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCACTAGGTGGCA
--AACAGATGGC-
 A G T C A G T C C G T A A G T C G A C T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C T G A
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCACTAGGTGGCA
ATCCAC---------
 A C G T A C G T A G T C A G T C C G T A A G T C G A C T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C T G A
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCACTAGGTGGCA
GCACCCCTGGGTGCC-
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C G A C T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C T G A
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C A C G T

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CCACTAGGTGGCA-
-----GGTTGGCAT
 A G T C A G T C C G T A A G T C G A C T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCACTAGGTGGCA
CACCCCCGGGGGGG-
 A C G T A C G T A G T C A G T C C G T A A G T C G A C T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C T G A
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCACTAGGTGGCA--
---CAAGATGGCGGC
 A G T C A G T C C G T A A G T C G A C T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C T G A A C G T A C G T
A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C