Information for 11-TTAAGATCAM (Motif 46)

A G C T A C G T C G T A C G T A A C T G G T C A A C G T A G T C C G T A G T C A
Reverse Opposite:
A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C G T C G T A T C G A
p-value:1e-6
log p-value:-1.447e+01
Information Content per bp:1.901
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif20.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets48.8 +/- 27.7bp
Average Position of motif in Background51.1 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.77
Offset:2
Orientation:forward strand
Alignment:TTAAGATCAM
--AAGGTCAC
 A G C T A C G T C G T A C G T A A C T G G T C A A C G T A G T C C G T A G T C A
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

Tcf7/MA0769.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TTAAGATCAM---
-AAAGATCAAAGG
 A G C T A C G T C G T A C G T A A C T G G T C A A C G T A G T C C G T A G T C A A C G T A C G T A C G T
A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

LEF1/MA0768.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TTAAGATCAM------
-AAAGATCAAAGGGTT
 A G C T A C G T C G T A C G T A A C T G G T C A A C G T A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTAAGATCAM
TCAAGGTCAN
 A G C T A C G T C G T A C G T A A C T G G T C A A C G T A G T C C G T A G T C A
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTAAGATCAM
TCAAGGTCAT
 A G C T A C G T C G T A C G T A A C T G G T C A A C G T A G T C C G T A G T C A
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTAAGATCAM
-TRAGGTCA-
 A G C T A C G T C G T A C G T A A C T G G T C A A C G T A G T C C G T A G T C A
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTAAGATCAM-
TCAAGGTCATA
 A G C T A C G T C G T A C G T A A C T G G T C A A C G T A G T C C G T A G T C A A C G T
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TTAAGATCAM---
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A G C T A C G T C G T A C G T A A C T G G T C A A C G T A G T C C G T A G T C A A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTAAGATCAM-------
NANAGATCAAAGGGNNN
 A G C T A C G T C G T A C G T A A C T G G T C A A C G T A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTAAGATCAM----
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A G C T A C G T C G T A C G T A A C T G G T C A A C G T A G T C C G T A G T C A A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A