Information for 13-TCAAACTCTTGAG (Motif 35)

A C G T G T A C C G T A C G T A C T G A A G T C A C G T A G T C A C G T A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G T A C G T A A C T G C G T A T C A G A G C T A C G T A C G T A C T G C G T A
p-value:1e-8
log p-value:-2.027e+01
Information Content per bp:1.938
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.2 +/- 25.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0111.1_Nkx2-2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCAAACTCTTGAG----
ATAACCACTTGAAAATT
 A C G T G T A C C G T A C G T A C T G A A G T C A C G T A G T C A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

PB0197.1_Zfp105_2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCAAACTCTTGAG----
NAAANTTATTGAANCAN
 A C G T G T A C C G T A C G T A C T G A A G T C A C G T A G T C A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCAAACTCTTGAG
---RSCACTYRAG
 A C G T G T A C C G T A C G T A C T G A A G T C A C G T A G T C A C G T A C G T A C T G C G T A A C T G
A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

PB0136.1_IRC900814_2/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TCAAACTCTTGAG-
ATGGAAAGTCGTAAAA
 A C G T A C G T A C G T G T A C C G T A C G T A C T G A A G T C A C G T A G T C A C G T A C G T A C T G C G T A A C T G A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:TCAAACTCTTGAG-----
-------CTTGAGTGGCT
 A C G T G T A C C G T A C G T A C T G A A G T C A C G T A G T C A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TCAAACTCTTGAG
----CCACTTGAA
 A C G T G T A C C G T A C G T A C T G A A G T C A C G T A G T C A C G T A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

PH0171.1_Nkx2-1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TCAAACTCTTGAG---
TAAGCCACTTGAAATT
 A C G T G T A C C G T A C G T A C T G A A G T C A C G T A G T C A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

PH0113.1_Nkx2-4/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TCAAACTCTTGAG---
TAAGCCACTTGAAATT
 A C G T G T A C C G T A C G T A C T G A A G T C A C G T A G T C A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TCAAACTCTTGAG
---ACCACTTGAA
 A C G T G T A C C G T A C G T A C T G A A G T C A C G T A G T C A C G T A C G T A C T G C G T A A C T G
A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TCAAACTCTTGAG
---NSCACTYVAV
 A C G T G T A C C G T A C G T A C T G A A G T C A C G T A G T C A C G T A C G T A C T G C G T A A C T G
A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G