Information for 3-TTGTCACGGC (Motif 32)

G A C T A C G T A C T G G C A T A G T C C G T A A T G C A C T G A C T G A T G C
Reverse Opposite:
T A C G G T A C A G T C T A C G A C G T A C T G C G T A A G T C C G T A C T G A
p-value:1e-9
log p-value:-2.171e+01
Information Content per bp:1.853
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif52.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets46.5 +/- 28.9bp
Average Position of motif in Background47.7 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:TTGTCACGGC
-AGTCACGC-
 G A C T A C G T A C T G G C A T A G T C C G T A A T G C A C T G A C T G A T G C
A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTGTCACGGC
NTGTCAN---
 G A C T A C G T A C T G G C A T A G T C C G T A A T G C A C T G A C T G A T G C
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TTGTCACGGC
YTGWCADY--
 G A C T A C G T A C T G G C A T A G T C C G T A A T G C A C T G A C T G A T G C
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTGTCACGGC
ARNTGACA----
 A C G T A C G T G A C T A C G T A C T G G C A T A G T C C G T A A T G C A C T G A C T G A T G C
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTGTCACGGC
CCTGTCAA---
 A C G T G A C T A C G T A C T G G C A T A G T C C G T A A T G C A C T G A C T G A T G C
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTGTCACGGC
VBTGWCAGCB-
 A C G T G A C T A C G T A C T G G C A T A G T C C G T A A T G C A C T G A C T G A T G C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTGTCACGGC
NNTTGGCANN--
 A C G T A C G T G A C T A C G T A C T G G C A T A G T C C G T A A T G C A C T G A C T G A T G C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:8
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TTGTCACGGC
NNAATTAGTCACGGT
 A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G G C A T A G T C C G T A A T G C A C T G A C T G A T G C
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

Rfx1/MA0509.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGTCACGGC---
GTTGCCATGGNAAC
 A C G T G A C T A C G T A C T G G C A T A G T C C G T A A T G C A C T G A C T G A T G C A C G T A C G T A C G T
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGTCACGGC
CTTGGCAA---
 A C G T G A C T A C G T A C T G G C A T A G T C C G T A A T G C A C T G A C T G A T G C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T