Information for 10-AGCCAKCAGAACT (Motif 25)

G T C A A T C G A G T C A T G C G T C A C A G T A T G C C G T A A C T G C G T A T C G A T A G C C G A T
Reverse Opposite:
C G T A A T C G A C G T A C G T A G T C A C G T A T C G G T C A A C G T A T C G A C T G A T G C A C G T
p-value:1e-10
log p-value:-2.433e+01
Information Content per bp:1.731
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif67.1
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets56.7 +/- 25.3bp
Average Position of motif in Background51.7 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGCCAKCAGAACT--
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T G T C A A T C G A G T C A T G C G T C A C A G T A T G C C G T A A C T G C G T A T C G A T A G C C G A T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGCCAKCAGAACT
CAGCC---------
 A C G T G T C A A T C G A G T C A T G C G T C A C A G T A T G C C G T A A C T G C G T A T C G A T A G C C G A T
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AGCCAKCAGAACT---
AADGAGVCANYASTACAGNC
 A C G T A C G T A C G T A C G T G T C A A T C G A G T C A T G C G T C A C A G T A T G C C G T A A C T G C G T A T C G A T A G C C G A T A C G T A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGCCAKCAGAACT
GGCCATTAAC---
 G T C A A T C G A G T C A T G C G T C A C A G T A T G C C G T A A C T G C G T A T C G A T A G C C G A T
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGCCAKCAGAACT
-GCCATCTGTT--
 G T C A A T C G A G T C A T G C G T C A C A G T A T G C C G T A A C T G C G T A T C G A T A G C C G A T
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGCCAKCAGAACT
TGAGTCAGCA-----
 A C G T A C G T G T C A A T C G A G T C A T G C G T C A C A G T A T G C C G T A A C T G C G T A T C G A T A G C C G A T
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T

VENTX/MA0724.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGCCAKCAGAACT
ACCGATTAG----
 G T C A A T C G A G T C A T G C G T C A C A G T A T G C C G T A A C T G C G T A T C G A T A G C C G A T
C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AGCCAKCAGAACT
----CACAGN---
 G T C A A T C G A G T C A T G C G T C A C A G T A T G C C G T A A C T G C G T A T C G A T A G C C G A T
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:AGCCAKCAGAACT
-----TCAGTCTT
 G T C A A T C G A G T C A T G C G T C A C A G T A T G C C G T A A C T G C G T A T C G A T A G C C G A T
A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AGCCAKCAGAACT-
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T G T C A A T C G A G T C A T G C G T C A C A G T A T G C C G T A A C T G C G T A T C G A T A G C C G A T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T