Information for 17-YTGGGAGWTGRATTTT (Motif 24)

A G T C A G C T C A T G A C T G A T C G C G T A A C T G C G A T A G C T A C T G T C G A C G T A C A G T A G C T G A C T A G C T
Reverse Opposite:
C T G A C G T A C T G A G T C A A C G T A G C T A G T C C T G A G C T A A G T C A C G T A T G C A G T C G A T C C T G A T C A G
p-value:1e-10
log p-value:-2.505e+01
Information Content per bp:1.738
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif12.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets51.6 +/- 30.7bp
Average Position of motif in Background57.9 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:1
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----YTGGGAGWTGRATTTT
GCMTBCTGGGAGTTGTAGTY-
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T C A T G A C T G A T C G C G T A A C T G C G A T A G C T A C T G T C G A C G T A C A G T A G C T G A C T A G C T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C A C G T

GFY(?)/Promoter/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:YTGGGAGWTGRATTTT
--GGGAATTGTAGT--
 A G T C A G C T C A T G A C T G A T C G C G T A A C T G C G A T A G C T A C T G T C G A C G T A C A G T A G C T G A C T A G C T
A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----YTGGGAGWTGRATTTT
GCATTCTGGGAATTGTAGTT-
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T C A T G A C T G A T C G C G T A A C T G C G A T A G C T A C T G T C G A C G T A C A G T A G C T G A C T A G C T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:YTGGGAGWTGRATTTT
TGCGGAGTGGGACTGG
 A G T C A G C T C A T G A C T G A T C G C G T A A C T G C G A T A G C T A C T G T C G A C G T A C A G T A G C T G A C T A G C T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:YTGGGAGWTGRATTTT
---GGAAGTGAAAST-
 A G T C A G C T C A T G A C T G A T C G C G T A A C T G C G A T A G C T A C T G T C G A C G T A C A G T A G C T G A C T A G C T
A C G T A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------YTGGGAGWTGRATTTT
RGSMTBCTGGGAAAT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T C A T G A C T G A T C G C G T A A C T G C G A T A G C T A C T G T C G A C G T A C A G T A G C T G A C T A G C T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:YTGGGAGWTGRATTTT
-TGGCAGTTGN-----
 A G T C A G C T C A T G A C T G A T C G C G T A A C T G C G A T A G C T A C T G T C G A C G T A C A G T A G C T G A C T A G C T
A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:YTGGGAGWTGRATTTT
--CGGAAGTGAAAC--
 A G T C A G C T C A T G A C T G A T C G C G T A A C T G C G A T A G C T A C T G T C G A C G T A C A G T A G C T G A C T A G C T
A C G T A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--YTGGGAGWTGRATTTT
NNNTGGCAGTTGGTNN--
 A C G T A C G T A G T C A G C T C A T G A C T G A T C G C G T A A C T G C G A T A G C T A C T G T C G A C G T A C A G T A G C T G A C T A G C T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:YTGGGAGWTGRATTTT
-TGGCAGTTGG-----
 A G T C A G C T C A T G A C T G A T C G C G T A A C T G C G A T A G C T A C T G T C G A C G T A C A G T A G C T G A C T A G C T
A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T