Information for 2-CATTGTTAGGGCC (Motif 2)

A G T C C G T A C A G T A C G T C T A G C G A T A G C T G T C A C T A G C A T G A C T G A G T C G T A C
Reverse Opposite:
A C T G A C T G A G T C G T A C A G T C A C G T C T G A C G T A A G T C C G T A G C T A C G A T A C T G
p-value:1e-19
log p-value:-4.480e+01
Information Content per bp:1.817
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.6 +/- 23.1bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CATTGTTAGGGCC
CCATTGTTYB----
 A C G T A G T C C G T A C A G T A C G T C T A G C G A T A G C T G T C A C T A G C A T G A C T G A G T C G T A C
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CATTGTTAGGGCC
-ATTGTTA-----
 A G T C C G T A C A G T A C G T C T A G C G A T A G C T G T C A C T A G C A T G A C T G A G T C G T A C
A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CATTGTTAGGGCC--
---RGTTAGTGCCCY
 A G T C C G T A C A G T A C G T C T A G C G A T A G C T G T C A C T A G C A T G A C T G A G T C G T A C A C G T A C G T
A C G T A C G T A C G T C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CATTGTTAGGGCC
CCWTTGTYYB----
 A C G T A G T C C G T A C A G T A C G T C T A G C G A T A G C T G T C A C T A G C A T G A C T G A G T C G T A C
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CATTGTTAGGGCC
-ATTGTT------
 A G T C C G T A C A G T A C G T C T A G C G A T A G C T G T C A C T A G C A T G A C T G A G T C G T A C
A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CATTGTTAGGGCC
CCATTGTTC-----
 A C G T A G T C C G T A C A G T A C G T C T A G C G A T A G C T G T C A C T A G C A T G A C T G A G T C G T A C
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CATTGTTAGGGCC
NCCATTGTTC-----
 A C G T A C G T A G T C C G T A C A G T A C G T C T A G C G A T A G C T G T C A C T A G C A T G A C T G A G T C G T A C
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CATTGTTAGGGCC
CTATAATTGTTAGCG--
 A C G T A C G T A C G T A C G T A G T C C G T A C A G T A C G T C T A G C G A T A G C T G T C A C T A G C A T G A C T G A G T C G T A C
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CATTGTTAGGGCC
CTTTGT-------
 A G T C C G T A C A G T A C G T C T A G C G A T A G C T G T C A C T A G C A T G A C T G A G T C G T A C
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CATTGTTAGGGCC
NCCATTGTTY-----
 A C G T A C G T A G T C C G T A C A G T A C G T C T A G C G A T A G C T G T C A C T A G C A T G A C T G A G T C G T A C
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T A C G T