Information for 10-TTAGAVACAGGATGAA (Motif 11)

C G A T C A G T C G T A A C T G C T G A T G A C C G T A G A T C G T C A C T A G C A T G G T C A A C G T A C T G C T G A G C T A
Reverse Opposite:
C G A T A G C T A G T C G T C A C A G T G A T C A G T C A C G T C A T G A C G T A C T G A G C T A G T C C G A T G T C A G C T A
p-value:1e-12
log p-value:-2.768e+01
Information Content per bp:1.699
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif52.0
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets55.1 +/- 26.0bp
Average Position of motif in Background44.0 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TTAGAVACAGGATGAA-
--GAGCACAGCAGGACA
 C G A T C A G T C G T A A C T G C T G A T G A C C G T A G A T C G T C A C T A G C A T G G T C A A C G T A C T G C T G A G C T A A C G T
A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTAGAVACAGGATGAA
AAACAGACAAAGGAAT--
 A C G T A C G T C G A T C A G T C G T A A C T G C T G A T G A C C G T A G A T C G T C A C T A G C A T G G T C A A C G T A C T G C T G A G C T A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TTAGAVACAGGATGAA----
--WNAGTCADAVTGAAACTN
 C G A T C A G T C G T A A C T G C T G A T G A C C G T A G A T C G T C A C T A G C A T G G T C A A C G T A C T G C T G A G C T A A C G T A C G T A C G T A C G T
A C G T A C G T G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TTAGAVACAGGATGAA--
NTNATGCAAYMNNHTGMAAY
 A C G T A C G T C G A T C A G T C G T A A C T G C T G A T G A C C G T A G A T C G T C A C T A G C A T G G T C A A C G T A C T G C T G A G C T A A C G T A C G T
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TTAGAVACAGGATGAA
CTACTTGGATACGGAAT---
 A C G T A C G T A C G T A C G T C G A T C A G T C G T A A C T G C T G A T G A C C G T A G A T C G T C A C T A G C A T G G T C A A C G T A C T G C T G A G C T A
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TTAGAVACAGGATGAA-
--CCACACAGCAGGAGA
 C G A T C A G T C G T A A C T G C T G A T G A C C G T A G A T C G T C A C T A G C A T G G T C A A C G T A C T G C T G A G C T A A C G T
A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TTAGAVACAGGATGAA-
--CCACACAGCAGGAGA
 C G A T C A G T C G T A A C T G C T G A T G A C C G T A G A T C G T C A C T A G C A T G G T C A A C G T A C T G C T G A G C T A A C G T
A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TTAGAVACAGGATGAA
----DCTCAGCAGG--
 C G A T C A G T C G T A A C T G C T G A T G A C C G T A G A T C G T C A C T A G C A T G G T C A A C G T A C T G C T G A G C T A
A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TTAGAVACAGGATGAA
-----AACAGGAAGT-
 C G A T C A G T C G T A A C T G C T G A T G A C C G T A G A T C G T C A C T A G C A T G G T C A A C G T A C T G C T G A G C T A
A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TTAGAVACAGGATGAA--
---BAGTCATANTGAAAG
 C G A T C A G T C G T A A C T G C T G A T G A C C G T A G A T C G T C A C T A G C A T G G T C A A C G T A C T G C T G A G C T A A C G T A C G T
A C G T A C G T A C G T A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G