Information for 2-CCCTGGTGGATTTCTG (Motif 4)

A T G C A G T C A T G C A C G T C T A G A C T G A C G T A C T G A C T G C T G A G A C T G A C T A G C T A T G C A G C T C T A G
Reverse Opposite:
A G T C C T G A A T C G C T G A C G T A C T G A A G C T A G T C A G T C C G T A T A G C A G T C C G T A A T C G C T A G A T C G
p-value:1e-10
log p-value:-2.524e+01
Information Content per bp:1.776
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.3 +/- 14.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CCCTGGTGGATTTCTG
-----GTGGAT-----
 A T G C A G T C A T G C A C G T C T A G A C T G A C G T A C T G A C T G C T G A G A C T G A C T A G C T A T G C A G C T C T A G
A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.57
Offset:-10
Orientation:forward strand
Alignment:----------CCCTGGTGGATTTCTG
CNNBRGCGCCCCCTGSTGGC------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T G C A C G T C T A G A C T G A C G T A C T G A C T G C T G A G A C T G A C T A G C T A T G C A G C T C T A G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------CCCTGGTGGATTTCTG
TAGCGCCCCCTGGTGGCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T G C A C G T C T A G A C T G A C G T A C T G A C T G C T G A G A C T G A C T A G C T A T G C A G C T C T A G
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGGTGGATTTCTG
CCCCCTGCTGTG------
 A C G T A C G T A T G C A G T C A T G C A C G T C T A G A C T G A C G T A C T G A C T G C T G A G A C T G A C T A G C T A T G C A G C T C T A G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGGTGGATTTCTG
NNANTGGTGGTCTTNNN
 A C G T A T G C A G T C A T G C A C G T C T A G A C T G A C G T A C T G A C T G C T G A G A C T G A C T A G C T A T G C A G C T C T A G
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.54
Offset:-8
Orientation:forward strand
Alignment:--------CCCTGGTGGATTTCTG
ANAGTGCCACCTGGTGGCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T G C A C G T C T A G A C T G A C G T A C T G A C T G C T G A G A C T G A C T A G C T A T G C A G C T C T A G
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCCTGGTGGATTTCTG
GGCCYCCTGCTGDGH-----
 A C G T A C G T A C G T A C G T A T G C A G T C A T G C A C G T C T A G A C T G A C G T A C T G A C T G C T G A G A C T G A C T A G C T A T G C A G C T C T A G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CCCTGGTGGATTTCTG
--NNTGTGGATTSS--
 A T G C A G T C A T G C A C G T C T A G A C T G A C G T A C T G A C T G C T G A G A C T G A C T A G C T A T G C A G C T C T A G
A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CCCTGGTGGATTTCTG
GYCTGGYYTNTGTCA-
 A T G C A G T C A T G C A C G T C T A G A C T G A C G T A C T G A C T G C T G A G A C T G A C T A G C T A T G C A G C T C T A G
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCCTGGTGGATTTCTG--
--NNATTGGACTTTNGNN
 A T G C A G T C A T G C A C G T C T A G A C T G A C G T A C T G A C T G C T G A G A C T G A C T A G C T A T G C A G C T C T A G A C G T A C G T
A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C