Information for 8-GGCTGGCGGG (Motif 17)

A C T G C T A G G T A C A C G T A C T G A C T G A T G C T A C G T C A G A T C G
Reverse Opposite:
A T G C A G T C A T G C T A C G G T A C A G T C C G T A A C T G A G T C G T A C
p-value:1e-6
log p-value:-1.600e+01
Information Content per bp:1.841
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.34%
Number of Background Sequences with motif227.7
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets54.0 +/- 27.3bp
Average Position of motif in Background49.1 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GGCTGGCGGG-----
NAGANTGGCGGGGNGNA
 A C G T A C G T A C T G C T A G G T A C A C G T A C T G A C T G A T G C T A C G T C A G A T C G A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGCTGGCGGG--
--CWGGCGGGAA
 A C T G C T A G G T A C A C G T A C T G A C T G A T G C T A C G T C A G A T C G A C G T A C G T
A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGCTGGCGGG---
-BTKGGCGGGAAA
 A C T G C T A G G T A C A C G T A C T G A C T G A T G C T A C G T C A G A T C G A C G T A C G T A C G T
A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGCTGGCGGG
NGCTN-----
 A C T G C T A G G T A C A C G T A C T G A C T G A T G C T A C G T C A G A T C G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGCTGGCGGG
TWGTCTGV----
 A C G T A C G T A C T G C T A G G T A C A C G T A C T G A C T G A T G C T A C G T C A G A T C G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGCTGGCGGG
--TTGGCA--
 A C T G C T A G G T A C A C G T A C T G A C T G A T G C T A C G T C A G A T C G
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGCTGGCGGG--
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A C T G C T A G G T A C A C G T A C T G A C T G A T G C T A C G T C A G A T C G A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGCTGGCGGG-----
---TGGCGGGAAAHB
 A C T G C T A G G T A C A C G T A C T G A C T G A T G C T A C G T C A G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGCTGGCGGG
-NTTGGCANN
 A C T G C T A G G T A C A C G T A C T G A C T G A T G C T A C G T C A G A T C G
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGCTGGCGGG----
---GGGCGGGAAGG
 A C T G C T A G G T A C A C G T A C T G A C T G A T G C T A C G T C A G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G