Information for 6-GTGTGAATGA (Motif 7)

A T C G C G A T A C T G A C G T C T A G C G T A G T C A A C G T C T A G C T G A
Reverse Opposite:
G A C T A G T C C G T A A C G T G C A T G A T C C G T A A G T C C G T A T A G C
p-value:1e-15
log p-value:-3.511e+01
Information Content per bp:1.834
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif4.13%
Number of Background Sequences with motif299.4
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets45.8 +/- 24.9bp
Average Position of motif in Background49.4 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX21/MA0690.1/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GTGTGAATGA
AAGGTGTGAA---
 A C G T A C G T A C G T A T C G C G A T A C T G A C G T C T A G C G T A G T C A A C G T C T A G C T G A
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGAATGA
AGGTGTTAAT--
 A C G T A C G T A T C G C G A T A C T G A C G T C T A G C G T A G T C A A C G T C T A G C T G A
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GTGTGAATGA
AGGTGTGAAA--
 A C G T A C G T A T C G C G A T A C T G A C G T C T A G C G T A G T C A A C G T C T A G C T G A
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GTGTGAATGA
AAGGTGTGAAA--
 A C G T A C G T A C G T A T C G C G A T A C T G A C G T C T A G C G T A G T C A A C G T C T A G C T G A
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GTGTGAATGA-----
ACTATGAATGAATGAT
 A C G T A T C G C G A T A C T G A C G T C T A G C G T A G T C A A C G T C T A G C T G A A C G T A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:6
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GTGTGAATGA
AAGGTGTKAA---
 A C G T A C G T A C G T A T C G C G A T A C T G A C G T C T A G C G T A G T C A A C G T C T A G C T G A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GTGTGAATGA----
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A T C G C G A T A C T G A C G T C T A G C G T A G T C A A C G T C T A G C T G A A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GTGTGAATGA
TAGGTGTGAAG--
 A C G T A C G T A C G T A T C G C G A T A C T G A C G T C T A G C G T A G T C A A C G T C T A G C T G A
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GTGTGAATGA
AGGTGTGA----
 A C G T A C G T A T C G C G A T A C T G A C G T C T A G C G T A G T C A A C G T C T A G C T G A
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:10
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GTGTGAATGA
AAGGTGTGAAAAT
 A C G T A C G T A C G T A T C G C G A T A C T G A C G T C T A G C G T A G T C A A C G T C T A G C T G A
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T