Information for 19-GGGGCGGAGGTGT (Motif 31)

A C T G A C T G A T C G C T A G T A G C A C T G A C T G C G T A A C T G A T C G C G A T A C T G C G A T
Reverse Opposite:
C G T A A G T C C G T A A T G C A G T C A C G T G T A C A G T C A C T G A G T C A T G C G T A C A G T C
p-value:1e-10
log p-value:-2.325e+01
Information Content per bp:1.841
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.7 +/- 25.0bp
Average Position of motif in Background41.1 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGGGCGGAGGTGT
AGGGGGCGGGGCTG-
 A C G T A C G T A C T G A C T G A T C G C T A G T A G C A C T G A C T G C G T A A C T G A T C G C G A T A C T G C G A T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GGGGCGGAGGTGT------
---GCGGAGGTGTCGCCTC
 A C T G A C T G A T C G C T A G T A G C A C T G A C T G C G T A A C T G A T C G C G A T A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCGGAGGTGT
NNTNAGGGGCGGNNNN--
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T C G C T A G T A G C A C T G A C T G C G T A A C T G A T C G C G A T A C T G C G A T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGGGCGGAGGTGT
RGKGGGCGGAGC---
 A C G T A C G T A C T G A C T G A T C G C T A G T A G C A C T G A C T G C G T A A C T G A T C G C G A T A C T G C G A T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.64
Offset:7
Orientation:forward strand
Alignment:GGGGCGGAGGTGT--
-------AGGTGTCA
 A C T G A C T G A T C G C T A G T A G C A C T G A C T G C G T A A C T G A T C G C G A T A C T G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

PB0202.1_Zfp410_2/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCGGAGGTGT
NNTNNGGGGCGGNGNGN-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T C G C T A G T A G C A C T G A C T G C G T A A C T G A T C G C G A T A C T G C G A T
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCGGAGGTGT
GGGGGCGGGGC---
 A C G T A C T G A C T G A T C G C T A G T A G C A C T G A C T G C G T A A C T G A T C G C G A T A C T G C G A T
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGGCGGAGGTGT
GTGGGGGAGGGG-
 A C T G A C T G A T C G C T A G T A G C A C T G A C T G C G T A A C T G A T C G C G A T A C T G C G A T
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T

TBX5/MA0807.1/Jaspar

Match Rank:9
Score:0.63
Offset:7
Orientation:forward strand
Alignment:GGGGCGGAGGTGT--
-------AGGTGTGA
 A C T G A C T G A T C G C T A G T A G C A C T G A C T G C G T A A C T G A T C G C G A T A C T G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A

PB0097.1_Zfp281_1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGGGCGGAGGTGT
GGGGGGGGGGGGGGA
 A C G T A C G T A C T G A C T G A T C G C T A G T A G C A C T G A C T G C G T A A C T G A T C G C G A T A C T G C G A T
A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A