Information for 19-CCAGCTGACATTTGCR (Motif 27)

G T A C A G T C C G T A A T C G T G A C C G A T C T A G C G T A A T G C G C T A A C G T A C G T A C G T A T C G G A T C T C G A
Reverse Opposite:
A G C T C A T G A T G C C G T A T C G A C G T A C A G T A T C G C G A T G A T C C G T A A C T G A T G C A C G T A C T G A C T G
p-value:1e-10
log p-value:-2.410e+01
Information Content per bp:1.722
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.6 +/- 22.0bp
Average Position of motif in Background47.9 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CCAGCTGACATTTGCR-
-----TGACCTTTNCNT
 G T A C A G T C C G T A A T C G T G A C C G A T C T A G C G T A A T G C G C T A A C G T A C G T A C G T A T C G G A T C T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCAGCTGACATTTGCR-
-NNNGTGACCTTTGNNN
 G T A C A G T C C G T A A T C G T G A C C G A T C T A G C G T A A T G C G C T A A C G T A C G T A C G T A T C G G A T C T C G A A C G T
A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PH0115.1_Nkx2-6/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCAGCTGACATTTGCR
TAAGCCACTTAACATT----
 A C G T A C G T A C G T A C G T G T A C A G T C C G T A A T C G T G A C C G A T C T A G C G T A A T G C G C T A A C G T A C G T A C G T A T C G G A T C T C G A
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCAGCTGACATTTGCR
-CNNTTGACCTTTG--
 G T A C A G T C C G T A A T C G T G A C C G A T C T A G C G T A A T G C G C T A A C G T A C G T A C G T A T C G G A T C T C G A
A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCAGCTGACATTTGCR-
-NNNNTGACCTTTNNNN
 G T A C A G T C C G T A A T C G T G A C C G A T C T A G C G T A A T G C G C T A A C G T A C G T A C G T A T C G G A T C T C G A A C G T
A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CCAGCTGACATTTGCR
----CTGACCTTTG--
 G T A C A G T C C G T A A T C G T G A C C G A T C T A G C G T A A T G C G C T A A C G T A C G T A C G T A T C G G A T C T C G A
A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCAGCTGACATTTGCR
TAAGCCACTTGAAATT----
 A C G T A C G T A C G T A C G T G T A C A G T C C G T A A T C G T G A C C G A T C T A G C G T A A T G C G C T A A C G T A C G T A C G T A T C G G A T C T C G A
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T A C G T A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCAGCTGACATTTGCR
TAAGCCACTTGAATTT----
 A C G T A C G T A C G T A C G T G T A C A G T C C G T A A T C G T G A C C G A T C T A G C G T A A T G C G C T A A C G T A C G T A C G T A T C G G A T C T C G A
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCAGCTGACATTTGCR
HCAGCTGDTN------
 G T A C A G T C C G T A A T C G T G A C C G A T C T A G C G T A A T G C G C T A A C G T A C G T A C G T A T C G G A T C T C G A
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCAGCTGACATTTGCR
TAAGCCACTTGAAATT----
 A C G T A C G T A C G T A C G T G T A C A G T C C G T A A T C G T G A C C G A T C T A G C G T A A T G C G C T A A C G T A C G T A C G T A T C G G A T C T C G A
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T A C G T A C G T A C G T A C G T