Information for 11-GTTKTCAGACATCTCT (Motif 16)

A C T G A G C T A C G T C A G T A G C T G T A C C G T A T A C G T C G A A G T C C G T A A G C T T A G C A G C T G T A C C G A T
Reverse Opposite:
C G T A A C T G C T G A A C T G T C G A G C A T T A C G A G C T A G T C C G A T A C T G C T G A G T C A G T C A C T G A T G A C
p-value:1e-12
log p-value:-2.926e+01
Information Content per bp:1.690
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif40.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets61.9 +/- 16.1bp
Average Position of motif in Background44.8 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTTKTCAGACATCTCT
-CTGTCTGTCACCT--
 A C T G A G C T A C G T C A G T A G C T G T A C C G T A T A C G T C G A A G T C C G T A A G C T T A G C A G C T G T A C C G A T
A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GTTKTCAGACATCTCT
AGGTGHCAGACA-----
 A C G T A C T G A G C T A C G T C A G T A G C T G T A C C G T A T A C G T C G A A G T C C G T A A G C T T A G C A G C T G T A C C G A T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GTTKTCAGACATCTCT---
--NNNCTGATATCTCNNNN
 A C T G A G C T A C G T C A G T A G C T G T A C C G T A T A C G T C G A A G T C C G T A A G C T T A G C A G C T G T A C C G A T A C G T A C G T A C G T
A C G T A C G T T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

EOMES/MA0800.1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GTTKTCAGACATCTCT
NTTTTCACACCTT---
 A C T G A G C T A C G T C A G T A G C T G T A C C G T A T A C G T C G A A G T C C G T A A G C T T A G C A G C T G T A C C G A T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GTTKTCAGACATCTCT
NNTTTTCACACCTTNNN
 A C G T A C T G A G C T A C G T C A G T A G C T G T A C C G T A T A C G T C G A A G T C C G T A A G C T T A G C A G C T G T A C C G A T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GTTKTCAGACATCTCT
--TTTCACACCT----
 A C T G A G C T A C G T C A G T A G C T G T A C C G T A T A C G T C G A A G T C C G T A A G C T T A G C A G C T G T A C C G A T
A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GTTKTCAGACATCTCT
CAAATCCAGACATCACA
 A C G T A C T G A G C T A C G T C A G T A G C T G T A C C G T A T A C G T C G A A G T C C G T A A G C T T A G C A G C T G T A C C G A T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PB0022.1_Gata5_1/Jaspar

Match Rank:8
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----GTTKTCAGACATCTCT
NTNTTCTTATCAGTNTN----
 A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C G T C A G T A G C T G T A C C G T A T A C G T C G A A G T C C G T A A G C T T A G C A G C T G T A C C G A T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A A C G T A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GTTKTCAGACATCTCT
YSTTATCT---------
 A C G T A C T G A G C T A C G T C A G T A G C T G T A C C G T A T A C G T C G A A G T C C G T A A G C T T A G C A G C T G T A C C G A T
A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GTTKTCAGACATCTCT
--KTTCACACCT----
 A C T G A G C T A C G T C A G T A G C T G T A C C G T A T A C G T C G A A G T C C G T A A G C T T A G C A G C T G T A C C G A T
A C G T A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T A C G T