Information for 9-RATGSTGWTACCWSAW (Motif 13)

T C A G T C G A C G A T A C T G T A G C C G A T A C T G C G T A A G C T C T G A G T A C A G T C C G T A A T C G C G T A G C T A
Reverse Opposite:
C G A T A C G T A T G C C G A T A C T G A C T G A G C T C T G A G C A T A G T C C G T A A T C G A G T C G C T A A G C T A G T C
p-value:1e-13
log p-value:-3.050e+01
Information Content per bp:1.690
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif14.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.8 +/- 25.4bp
Average Position of motif in Background57.2 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0166.1_Six6_2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:RATGSTGWTACCWSAW-
AATNTTGATACCCTATN
 T C A G T C G A C G A T A C T G T A G C C G A T A C T G C G T A A G C T C T G A G T A C A G T C C G T A A T C G C G T A G C T A A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

PH0165.1_Six6_1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:RATGSTGWTACCWSAW-
ANANNTGATACCCTATN
 T C A G T C G A C G A T A C T G T A G C C G A T A C T G C G T A A G C T C T G A G T A C A G T C C G T A A T C G C G T A G C T A A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

PH0162.1_Six2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RATGSTGWTACCWSAW-
ANANGTGATACCCCATT
 T C A G T C G A C G A T A C T G T A G C C G A T A C T G C G T A A G C T C T G A G T A C A G T C C G T A A T C G C G T A G C T A A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

PH0161.1_Six1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RATGSTGWTACCWSAW-
ANNNATGATACCCCATC
 T C A G T C G A C G A T A C T G T A G C C G A T A C T G C G T A A G C T C T G A G T A C A G T C C G T A A T C G C G T A G C T A A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-RATGSTGWTACCWSAW
AGATGCTRCTRCCHT--
 A C G T T C A G T C G A C G A T A C T G T A G C C G A T A C T G C G T A A G C T C T G A G T A C A G T C C G T A A T C G C G T A G C T A
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T A C G T

Six3/MA0631.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RATGSTGWTACCWSAW-
ANANGTGATACCCTATN
 T C A G T C G A C G A T A C T G T A G C C G A T A C T G C G T A A G C T C T G A G T A C A G T C C G T A A T C G C G T A G C T A A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RATGSTGWTACCWSAW-
ANANGTGATACCCTATN
 T C A G T C G A C G A T A C T G T A G C C G A T A C T G C G T A A G C T C T G A G T A C A G T C C G T A A T C G C G T A G C T A A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:RATGSTGWTACCWSAW-
-------ATGCCAGACN
 T C A G T C G A C G A T A C T G T A G C C G A T A C T G C G T A A G C T C T G A G T A C A G T C C G T A A T C G C G T A G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:RATGSTGWTACCWSAW
---GGTGYTGACAGS-
 T C A G T C G A C G A T A C T G T A G C C G A T A C T G C G T A A G C T C T G A G T A C A G T C C G T A A T C G C G T A G C T A
A C G T A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:RATGSTGWTACCWSAW-
ANANNTGATACCCNATN
 T C A G T C G A C G A T A C T G T A G C C G A T A C T G C G T A A G C T C T G A G T A C A G T C C G T A A T C G C G T A G C T A A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T