Information for 6-TGACCYTMCYAST (Motif 9)

A C G T A C T G C G T A A G T C A G T C A G C T A C G T G T C A A G T C A G C T C G T A A T C G A C G T
Reverse Opposite:
C G T A A T G C A C G T C T G A A C T G C A G T G T C A C T G A A C T G A C T G A C G T A G T C C G T A
p-value:1e-8
log p-value:-1.923e+01
Information Content per bp:1.873
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.5 +/- 27.3bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGACCYTMCYAST
TGACCT-------
 A C G T A C T G C G T A A G T C A G T C A G C T A C G T G T C A A G T C A G C T C G T A A T C G A C G T
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGACCYTMCYAST
GTGACCTT------
 A C G T A C G T A C T G C G T A A G T C A G T C A G C T A C G T G T C A A G T C A G C T C G T A A T C G A C G T
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGACCYTMCYAST
TGACCTYA-----
 A C G T A C T G C G T A A G T C A G T C A G C T A C G T G T C A A G T C A G C T C G T A A T C G A C G T
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGACCYTMCYAST
TGACCYCT-----
 A C G T A C T G C G T A A G T C A G T C A G C T A C G T G T C A A G T C A G C T C G T A A T C G A C G T
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGACCYTMCYAST
NTGACCTTGA----
 A C G T A C G T A C T G C G T A A G T C A G T C A G C T A C G T G T C A A G T C A G C T C G T A A T C G A C G T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGACCYTMCYAST
ATGACCTTGA----
 A C G T A C G T A C T G C G T A A G T C A G T C A G C T A C G T G T C A A G T C A G C T C G T A A T C G A C G T
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TGACCYTMCYAST
CNNTTGACCTTTG----
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T A C G T G T C A A G T C A G C T C G T A A T C G A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGACCYTMCYAST
TGACCTTTNCNT-
 A C G T A C T G C G T A A G T C A G T C A G C T A C G T G T C A A G T C A G C T C G T A A T C G A C G T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGACCYTMCYAST
TGACCTTGAT---
 A C G T A C T G C G T A A G T C A G T C A G C T A C G T G T C A A G T C A G C T C G T A A T C G A C G T
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGACCYTMCYAST
NNNNTGACCTTTNNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T A C G T G T C A A G T C A G C T C G T A A T C G A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A A C G T