Information for 7-GGGATCAGGGGTA (Motif 10)

A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C T G C G A T C G T A
Reverse Opposite:
A C G T C G T A A G T C A G T C A G T C A G T C A C G T C T A G C G T A A C G T A G T C A G T C A G T C
p-value:1e-8
log p-value:-1.923e+01
Information Content per bp:1.940
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.8 +/- 24.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGGATCAGGGGTA
NGGATTAN-----
 A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C T G C G A T C G T A
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGGATCAGGGGTA
NNGGATTAGN----
 A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C T G C G A T C G T A
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGGATCAGGGGTA
GGGATTANN----
 A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C T G C G A T C G T A
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGGATCAGGGGTA
GNGGATTAGN----
 A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C T G C G A T C G T A
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGATCAGGGGTA--
RGSMTBCTGGGAAAT
 A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C T G C G A T C G T A A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGGATCAGGGGTA
-GGATTAGC----
 A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C T G C G A T C G T A
A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGATCAGGGGTA
GGGATTAA-----
 A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C T G C G A T C G T A
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGGATCAGGGGTA
VRGGATTARN----
 A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C T G C G A T C G T A
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGGATCAGGGGTA
RGGATTAR-----
 A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C T G C G A T C G T A
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGGATCAGGGGTA-
----GGAGGGGGAA
 A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C T G C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A