Information for 4-CACCAGCGCCCCC (Motif 3)

A G T C T G C A T G A C A T G C G T C A A C T G G A T C C T A G G T A C A G T C G T A C A G T C G T A C
Reverse Opposite:
A C T G C T A G A C T G A C T G A C T G G A T C C T A G T A G C A C G T A T C G A C T G A C G T T A C G
p-value:1e-18
log p-value:-4.265e+01
Information Content per bp:1.778
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif4.26%
Number of Background Sequences with motif236.5
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets55.8 +/- 14.9bp
Average Position of motif in Background47.8 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CACCAGCGCCCCC-
NAGCCCCGCCCCCN
 A G T C T G C A T G A C A T G C G T C A A C T G G A T C C T A G G T A C A G T C G T A C A G T C G T A C A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CACCAGCGCCCCC-----
-GGTCCCGCCCCCTTCTC
 A G T C T G C A T G A C A T G C G T C A A C T G G A T C C T A G G T A C A G T C G T A C A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CACCAGCGCCCCC-------
CNNBRGCGCCCCCTGSTGGC
 A G T C T G C A T G A C A T G C G T C A A C T G G A T C C T A G G T A C A G T C G T A C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

EGR1/MA0162.2/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CACCAGCGCCCCC---
--CCCCCGCCCCCGCC
 A G T C T G C A T G A C A T G C G T C A A C T G G A T C C T A G G T A C A G T C G T A C A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

KLF16/MA0741.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CACCAGCGCCCCC
--GCCACGCCCCC
 A G T C T G C A T G A C A T G C G T C A A C T G G A T C C T A G G T A C A G T C G T A C A G T C G T A C
A C G T A C G T T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C

PB0010.1_Egr1_1/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CACCAGCGCCCCC-----
----TCCGCCCCCGCATT
 A G T C T G C A T G A C A T G C G T C A A C T G G A T C C T A G G T A C A G T C G T A C A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

SP3/MA0746.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CACCAGCGCCCCC
--GCCACGCCCCC
 A G T C T G C A T G A C A T G C G T C A A C T G G A T C C T A G G T A C A G T C G T A C A G T C G T A C
A C G T A C G T T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CACCAGCGCCCCC-
--GCCMCGCCCMCY
 A G T C T G C A T G A C A T G C G T C A A C T G G A T C C T A G G T A C A G T C G T A C A G T C G T A C A C G T
A C G T A C G T T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C

SP4/MA0685.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CACCAGCGCCCCC---
TAAGCCACGCCCCCTTT
 A C G T A G T C T G C A T G A C A T G C G T C A A C T G G A T C C T A G G T A C A G T C G T A C A G T C G T A C A C G T A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CACCAGCGCCCCC-
--GCTCCGCCCMCY
 A G T C T G C A T G A C A T G C G T C A A C T G G A T C C T A G G T A C A G T C G T A C A G T C G T A C A C G T
A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T