Information for 6-AATCGTTATT (Motif 19)

C G T A C G T A A G C T A G T C A T C G C G A T A C G T C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A C G A T C G T A C G T A A T G C T C A G C T G A A C G T A C G T
p-value:1e-9
log p-value:-2.233e+01
Information Content per bp:1.871
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.4 +/- 32.5bp
Average Position of motif in Background27.5 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----AATCGTTATT---
AAAACATCGTTTTTAAG
 A C G T A C G T A C G T A C G T C G T A C G T A A G C T A G T C A T C G C G A T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

PB0046.1_Mybl1_1/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----AATCGTTATT--
TTGAAAACCGTTAATTT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G C T A G T C A T C G C G A T A C G T C G T A A C G T A C G T A C G T A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

PB0045.1_Myb_1/Jaspar

Match Rank:3
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----AATCGTTATT--
ATGGAAACCGTTATTTT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G C T A G T C A T C G C G A T A C G T C G T A A C G T A C G T A C G T A C G T
G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----AATCGTTATT
CCTTAATNGNTTTT
 A C G T A C G T A C G T A C G T C G T A C G T A A G C T A G T C A T C G C G A T A C G T C G T A A C G T A C G T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

ONECUT1/MA0679.1/Jaspar

Match Rank:5
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----AATCGTTATT
AAAAAATCGATAAT
 A C G T A C G T A C G T A C G T C G T A C G T A A G C T A G T C A T C G C G A T A C G T C G T A A C G T A C G T
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

ONECUT2/MA0756.1/Jaspar

Match Rank:6
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AATCGTTATT
AAAAAATCGATAAT
 A C G T A C G T A C G T A C G T C G T A C G T A A G C T A G T C A T C G C G A T A C G T C G T A A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

PB0172.1_Sox1_2/Jaspar

Match Rank:7
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AATCGTTATT-
CTATAATTGTTAGCG
 A C G T A C G T A C G T A C G T C G T A C G T A A G C T A G T C A T C G C G A T A C G T C G T A A C G T A C G T A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AATCGTTATT---
TAATTGTTCTAAAC
 A C G T C G T A C G T A A G C T A G T C A T C G C G A T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0066.1_Sox17_1/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----AATCGTTATT
NNATNAATTGTTTNN
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G C T A G T C A T C G C G A T A C G T C G T A A C G T A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

VENTX/MA0724.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AATCGTTATT
CTAATCGNT---
 A C G T A C G T C G T A C G T A A G C T A G T C A T C G C G A T A C G T C G T A A C G T A C G T
G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T A C G T A C G T A C G T