Information for 9-GGAGTCAGCTGACCCC (Motif 7)

A T C G C T A G C T G A C T A G C A G T A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C T A G C T A G C A G T C
Reverse Opposite:
C T A G A C T G A T C G T A C G A C G T A G T C C G T A A C T G A G T C A C G T A C T G G C T A A G T C A G C T A G T C A T G C
p-value:1e-12
log p-value:-2.778e+01
Information Content per bp:1.797
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.0 +/- 24.1bp
Average Position of motif in Background24.6 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:GGAGTCAGCTGACCCC
--NAHCAGCTGD----
 A T C G C T A G C T G A C T A G C A G T A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C T A G C T A G C A G T C
A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGAGTCAGCTGACCCC
NGNGACAGCTGCN---
 A T C G C T A G C T G A C T A G C A G T A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C T A G C T A G C A G T C
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:3
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GGAGTCAGCTGACCCC
---AACAGCTGAT---
 A T C G C T A G C T G A C T A G C A G T A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C T A G C T A G C A G T C
A C G T A C G T A C G T T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GGAGTCAGCTGACCCC
---GACAGCTGCAG--
 A T C G C T A G C T G A C T A G C A G T A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C T A G C T A G C A G T C
A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GGAGTCAGCTGACCCC
---AACAGCTG-----
 A T C G C T A G C T G A C T A G C A G T A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C T A G C T A G C A G T C
A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GGAGTCAGCTGACCCC
---AACAGCTGCAG--
 A T C G C T A G C T G A C T A G C A G T A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C T A G C T A G C A G T C
A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGAGTCAGCTGACCCC
AGAGRRACAGCWGAC---
 A C G T A C G T A T C G C T A G C T G A C T A G C A G T A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C T A G C T A G C A G T C
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GGAGTCAGCTGACCCC
---AGCAGCTGCTNN-
 A T C G C T A G C T G A C T A G C A G T A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C T A G C T A G C A G T C
A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GGAGTCAGCTGACCCC
---ANCAGCTG-----
 A T C G C T A G C T G A C T A G C A G T A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C T A G C T A G C A G T C
A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGAGTCAGCTGACCCC
---NVCAGCTGBBNN-
 A T C G C T A G C T G A C T A G C A G T A G T C C G T A A C T G A G T C A C G T A C T G C G T A A G T C T A G C T A G C A G T C
A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T