Information for 18-CCGCCCTGTCGCG (Motif 27)

A G T C A G T C A C T G A G T C A G T C A G T C A C G T A T C G A C G T A G T C A C T G A G T C A T C G
Reverse Opposite:
A T G C A C T G A G T C A C T G C G T A A T G C C G T A A C T G A C T G A C T G A G T C A C T G A C T G
p-value:1e-8
log p-value:-1.977e+01
Information Content per bp:1.935
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.5 +/- 16.3bp
Average Position of motif in Background49.8 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCGCCCTGTCGCG
GCCCCGCCCCCTCCC-
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C A C G T A T C G A C G T A G T C A C T G A G T C A T C G
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCCTGTCGCG
GCCGCCATCTTG--
 A C G T A G T C A G T C A C T G A G T C A G T C A G T C A C G T A T C G A C G T A G T C A C T G A G T C A T C G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCGCCCTGTCGCG
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C A C G T A T C G A C G T A G T C A C T G A G T C A T C G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

PB0107.1_Ascl2_2/Jaspar

Match Rank:4
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CCGCCCTGTCGCG
CTATCCCCGCCCTATT---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C A C G T A T C G A C G T A G T C A C T G A G T C A T C G
A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCGCCCTGTCGCG
TCCGCCCCCGCATT
 A C G T A G T C A G T C A C T G A G T C A G T C A G T C A C G T A T C G A C G T A G T C A C T G A G T C A T C G
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCCTGTCGCG
GCTCCGCCCMCY----
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C A C G T A T C G A C G T A G T C A C T G A G T C A T C G
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CCGCCCTGTCGCG
NAGCCCCGCCCCCN----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C A C G T A T C G A C G T A G T C A C T G A G T C A T C G
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCGCCCTGTCGCG
GTCCGCCATTA----
 A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C A C G T A T C G A C G T A G T C A C T G A G T C A T C G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T A C G T

ZBED1/MA0749.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CCGCCCTGTCGCG----
----TATGTCGCGATAG
 A G T C A G T C A C T G A G T C A G T C A G T C A C G T A T C G A C G T A G T C A C T G A G T C A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T G C A C G A T C T A G A G C T A G T C C T A G A G T C T C A G C T G A A G C T G C T A C A T G

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCGCCCTGTCGCG
CCCCCGCCCCCGCC--
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C A C G T A T C G A C G T A G T C A C T G A G T C A T C G
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T