Information for 20-TGGCTTTATTCAACCT (Motif 23)

A C G T A C T G A C T G G T A C A C G T C G A T A G C T C G T A A C G T A C G T A G T C G T C A C G T A A G T C A G T C A G C T
Reverse Opposite:
C T G A A C T G A C T G C G A T A C G T A C T G C G T A T C G A A C G T C T G A G C T A C G T A A C T G A G T C A G T C C G T A
p-value:1e-9
log p-value:-2.199e+01
Information Content per bp:1.889
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.6 +/- 17.5bp
Average Position of motif in Background74.7 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TGGCTTTATTCAACCT
GYCTGGYYTNTGTCA----
 A C G T A C G T A C G T A C G T A C T G A C T G G T A C A C G T C G A T A G C T C G T A A C G T A C G T A G T C G T C A C G T A A G T C A G T C A G C T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGGCTTTATTCAACCT
NNCATTCATTCATNNN
 A C G T A C T G A C T G G T A C A C G T C G A T A G C T C G T A A C G T A C G T A G T C G T C A C G T A A G T C A G T C A G C T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0001.1_Arid3a_1/Jaspar

Match Rank:3
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TGGCTTTATTCAACCT-
GGGTTTAATTAAAATTC
 A C G T A C T G A C T G G T A C A C G T C G A T A G C T C G T A A C G T A C G T A G T C G T C A C G T A A G T C A G T C A G C T A C G T
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C

PB0197.1_Zfp105_2/Jaspar

Match Rank:4
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:TGGCTTTATTCAACCT-
NAAANTTATTGAANCAN
 A C G T A C T G A C T G G T A C A C G T C G A T A G C T C G T A A C G T A C G T A G T C G T C A C G T A A G T C A G T C A G C T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:TGGCTTTATTCAACCT
---GAATATTCAT---
 A C G T A C T G A C T G G T A C A C G T C G A T A G C T C G T A A C G T A C G T A G T C G T C A C G T A A G T C A G T C A G C T
A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:TGGCTTTATTCAACCT
---GHATATKCAT---
 A C G T A C T G A C T G G T A C A C G T C G A T A G C T C G T A A C G T A C G T A G T C G T C A C G T A A G T C A G T C A G C T
A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-TGGCTTTATTCAACCT
TTGGCA-----------
 A C G T A C G T A C T G A C T G G T A C A C G T C G A T A G C T C G T A A C G T A C G T A G T C G T C A C G T A A G T C A G T C A G C T
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:8
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-TGGCTTTATTCAACCT
TTGGCATGGTGCCA---
 A C G T A C G T A C T G A C T G G T A C A C G T C G A T A G C T C G T A A C G T A C G T A G T C G T C A C G T A A G T C A G T C A G C T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-TGGCTTTATTCAACCT
CTGGCAGNCTGCCA---
 A C G T A C G T A C T G A C T G G T A C A C G T C G A T A G C T C G T A A C G T A C G T A G T C G T C A C G T A A G T C A G T C A G C T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-TGGCTTTATTCAACCT
TTGACTTTT--------
 A C G T A C G T A C T G A C T G G T A C A C G T C G A T A G C T C G T A A C G T A C G T A G T C G T C A C G T A A G T C A G T C A G C T
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T