Information for 12-CTCTGTYCMGCAC (Motif 12)

A G T C A C G T G T A C A C G T A C T G A C G T A G C T A G T C G T A C A C T G A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A G T C A C T G A C T G C T G A C G T A A G T C G T C A A C T G G T C A A C T G
p-value:1e-11
log p-value:-2.544e+01
Information Content per bp:1.912
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets26.6 +/- 17.3bp
Average Position of motif in Background62.3 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTCTGTYCMGCAC
YCTTTGTTCC----
 A C G T A G T C A C G T G T A C A C G T A C T G A C G T A G C T A G T C G T A C A C T G A G T C C G T A A G T C
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTCTGTYCMGCAC
---GGTCCCGCCC
 A G T C A C G T G T A C A C G T A C T G A C G T A G C T A G T C G T A C A C T G A G T C C G T A A G T C
A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCTGTYCMGCAC--
--CTGTCTGTCACCT
 A G T C A C G T G T A C A C G T A C T G A C G T A G C T A G T C G T A C A C T G A G T C C G T A A G T C A C G T A C G T
A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTCTGTYCMGCAC
TKCTGTTCCA---
 A G T C A C G T G T A C A C G T A C T G A C G T A G C T A G T C G T A C A C T G A G T C C G T A A G T C
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTCTGTYCMGCAC--
---TGTCTGDCACCT
 A G T C A C G T G T A C A C G T A C T G A C G T A G C T A G T C G T A C A C T G A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTCTGTYCMGCAC
CCWTTGTYYB----
 A C G T A G T C A C G T G T A C A C G T A C T G A C G T A G C T A G T C G T A C A C T G A G T C C G T A A G T C
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTCTGTYCMGCAC
CCTTTGTTTT----
 A C G T A G T C A C G T G T A C A C G T A C T G A C G T A G C T A G T C G T A C A C T G A G T C C G T A A G T C
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CTCTGTYCMGCAC
CTTTGT-------
 A G T C A C G T G T A C A C G T A C T G A C G T A G C T A G T C G T A C A C T G A G T C C G T A A G T C
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----CTCTGTYCMGCAC
TNNTCCTTTGTTCTNNT-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T G T A C A C G T A C T G A C G T A G C T A G T C G T A C A C T G A G T C C G T A A G T C
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----CTCTGTYCMGCAC
NNNTCCTTTGTTCTNNN-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T G T A C A C G T A C T G A C G T A G C T A G T C G T A C A C T G A G T C C G T A A G T C
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T